Detailed information NTG1085615

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACLB1F_RS02005
• Genome accession: NZ_CP177161
• Coordinates: 396799..397947 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ZJ5
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 391799..402947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLB1F_RS01985 (ACLB1F_01985)	-	392202..392885 (-)	684	WP_032872874.1	ABC transporter ATP-binding protein	-
ACLB1F_RS01990 (ACLB1F_01990)	-	392900..394330 (-)	1431	WP_032872876.1	ABC transporter permease	-
ACLB1F_RS01995 (ACLB1F_01995)	-	394543..395226 (+)	684	WP_032872879.1	response regulator transcription factor	-
ACLB1F_RS02000 (ACLB1F_02000)	-	395213..396646 (+)	1434	WP_161503657.1	sensor histidine kinase	-
ACLB1F_RS02005 (ACLB1F_02005)	rapC	396799..397947 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
ACLB1F_RS02010 (ACLB1F_02010)	phrC	397931..398050 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
ACLB1F_RS02015 (ACLB1F_02015)	-	398201..398311 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
ACLB1F_RS02020 (ACLB1F_02020)	-	398391..399755 (-)	1365	WP_007609394.1	aspartate kinase	-
ACLB1F_RS02025 (ACLB1F_02025)	ceuB	400169..401122 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
ACLB1F_RS02030 (ACLB1F_02030)	-	401112..402059 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
ACLB1F_RS02035 (ACLB1F_02035)	-	402053..402811 (+)	759	WP_007609404.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1085615 ACLB1F_RS02005 WP_007410270.1 396799..397947(+) (rapC) [Bacillus velezensis strain ZJ5]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1085615 ACLB1F_RS02005 WP_007410270.1 396799..397947(+) (rapC) [Bacillus velezensis strain ZJ5]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568