Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | ACLHWD_RS03175 | Genome accession | NZ_CP177121 |
| Coordinates | 644740..646557 (+) | Length | 605 a.a. |
| NCBI ID | WP_193991273.1 | Uniprot ID | - |
| Organism | Vagococcus salmoninarum strain 2022-418 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 639740..651557
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLHWD_RS03155 (ACLHWD_03155) | - | 639964..640851 (-) | 888 | WP_193991277.1 | LysR family transcriptional regulator | - |
| ACLHWD_RS03160 (ACLHWD_03160) | - | 640977..641996 (+) | 1020 | WP_193991275.1 | YeiH family protein | - |
| ACLHWD_RS03165 (ACLHWD_03165) | - | 642171..643436 (+) | 1266 | WP_126780326.1 | NCS2 family permease | - |
| ACLHWD_RS03170 (ACLHWD_03170) | - | 643525..644685 (+) | 1161 | WP_170174762.1 | competence protein CoiA | - |
| ACLHWD_RS03175 (ACLHWD_03175) | pepF | 644740..646557 (+) | 1818 | WP_193991273.1 | oligoendopeptidase F | Regulator |
| ACLHWD_RS03180 (ACLHWD_03180) | - | 646594..647241 (-) | 648 | WP_126780875.1 | DsbA family protein | - |
| ACLHWD_RS03185 (ACLHWD_03185) | - | 647325..647915 (-) | 591 | WP_126780873.1 | CYTH domain-containing protein | - |
| ACLHWD_RS03190 (ACLHWD_03190) | - | 648109..648816 (+) | 708 | WP_193991271.1 | GTP pyrophosphokinase family protein | - |
| ACLHWD_RS03195 (ACLHWD_03195) | - | 648833..649645 (+) | 813 | WP_193991268.1 | NAD kinase | - |
| ACLHWD_RS03200 (ACLHWD_03200) | - | 649653..650543 (+) | 891 | WP_126780867.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 605 a.a. Molecular weight: 68833.77 Da Isoelectric Point: 4.5432
>NTDB_id=1085395 ACLHWD_RS03175 WP_193991273.1 644740..646557(+) (pepF) [Vagococcus salmoninarum strain 2022-418]
MSEAKQLPKREELLEKDTWDLTKIFPNDQAFEDSFAAFNQELVEASSYQGTLATGADAFLAALTFIGEISRKFEVLYVYS
HLKNDQDTANTTYQGMHAKAGSLGAQANEAISWFEPELLQLTDEQVWAYFDENSDLEIYRHFVTNILSDRPHVLSEKEEA
LLAGAGEIFGAAGRTFSIFNNADLKFPTVKNDKGETIQLSHGVYGQLLESTDPQVREEAFKGMYSVYEQFQNTMATNLSN
HVKTHNYQATVRNYSSAREASLANNHIPEAVYDTLLHVVDKNLPLLHRYVALRKELLGVETLHMYDMYTPILGEAPIRYS
YDEAREKAITALQPLGAEYMAVVEEAFSSRWIDVVENQGKRSGAYSSGCYDTAPYILMNWHDSLDQLYTLVHEMGHSVHS
YFTRSNQPYVYGDYSIFLAEIASTTNENLLTEYLLATETDPEVRAFVLNRYLDGFKGTIFRQTQFAEFEHFIHTEDAKGV
PLTAEYLNTYYADLNAKYYGEAVARDSEIAVEWARIPHFYYNHYVYQYSTGFSAASTLAEKIYTEETGALDKYLTYLKAG
NSDFPIEVMKKAGVDMTEATYIEEAMKVFEARLNEFETLVASFKK
MSEAKQLPKREELLEKDTWDLTKIFPNDQAFEDSFAAFNQELVEASSYQGTLATGADAFLAALTFIGEISRKFEVLYVYS
HLKNDQDTANTTYQGMHAKAGSLGAQANEAISWFEPELLQLTDEQVWAYFDENSDLEIYRHFVTNILSDRPHVLSEKEEA
LLAGAGEIFGAAGRTFSIFNNADLKFPTVKNDKGETIQLSHGVYGQLLESTDPQVREEAFKGMYSVYEQFQNTMATNLSN
HVKTHNYQATVRNYSSAREASLANNHIPEAVYDTLLHVVDKNLPLLHRYVALRKELLGVETLHMYDMYTPILGEAPIRYS
YDEAREKAITALQPLGAEYMAVVEEAFSSRWIDVVENQGKRSGAYSSGCYDTAPYILMNWHDSLDQLYTLVHEMGHSVHS
YFTRSNQPYVYGDYSIFLAEIASTTNENLLTEYLLATETDPEVRAFVLNRYLDGFKGTIFRQTQFAEFEHFIHTEDAKGV
PLTAEYLNTYYADLNAKYYGEAVARDSEIAVEWARIPHFYYNHYVYQYSTGFSAASTLAEKIYTEETGALDKYLTYLKAG
NSDFPIEVMKKAGVDMTEATYIEEAMKVFEARLNEFETLVASFKK
Nucleotide
Download Length: 1818 bp
>NTDB_id=1085395 ACLHWD_RS03175 WP_193991273.1 644740..646557(+) (pepF) [Vagococcus salmoninarum strain 2022-418]
ATGAGTGAAGCAAAACAATTACCAAAACGTGAGGAACTACTTGAAAAAGACACTTGGGATTTAACCAAAATCTTTCCAAA
TGATCAAGCTTTTGAAGACAGTTTCGCCGCATTTAATCAAGAACTAGTCGAGGCCAGCAGTTACCAAGGGACTTTAGCCA
CTGGAGCCGATGCTTTCTTAGCAGCCTTAACTTTTATTGGGGAAATTTCTCGGAAGTTTGAAGTTCTTTATGTCTATTCT
CATTTAAAAAATGACCAAGATACAGCGAATACGACGTACCAAGGCATGCACGCCAAAGCAGGGAGTTTAGGGGCACAAGC
TAATGAAGCCATTTCCTGGTTTGAACCAGAATTACTGCAATTAACTGATGAGCAAGTCTGGGCTTACTTTGATGAGAATT
CTGATTTAGAAATTTACCGTCATTTTGTCACTAATATTTTAAGTGACAGACCACACGTTTTATCAGAAAAAGAAGAAGCG
TTATTAGCTGGTGCAGGTGAAATTTTCGGCGCAGCTGGCAGAACTTTCTCAATTTTTAATAATGCGGATTTAAAATTCCC
GACAGTTAAAAATGACAAAGGTGAAACGATTCAATTGTCTCACGGTGTTTATGGTCAACTCTTAGAAAGCACTGACCCAC
AAGTCCGTGAAGAGGCTTTTAAAGGCATGTATAGTGTCTATGAGCAGTTCCAAAACACAATGGCGACTAACTTATCGAAT
CACGTTAAGACTCATAACTATCAAGCAACAGTTCGTAATTACAGCTCAGCTCGGGAAGCGTCATTAGCGAATAATCATAT
TCCAGAAGCTGTGTATGACACATTGTTACATGTTGTTGATAAAAACTTACCTTTGTTACATCGTTATGTGGCATTACGTA
AAGAGTTACTAGGAGTAGAGACGTTACACATGTATGACATGTATACACCGATTCTTGGGGAAGCACCGATTCGTTATTCA
TATGATGAAGCCCGTGAAAAAGCAATCACTGCTTTACAACCTCTAGGGGCTGAATATATGGCAGTCGTTGAAGAAGCCTT
TAGTAGCCGTTGGATCGATGTTGTTGAAAACCAAGGGAAGCGTAGTGGGGCTTACTCTTCAGGTTGTTACGATACAGCAC
CTTATATTTTAATGAACTGGCACGATAGCTTAGATCAATTGTATACTCTCGTCCATGAAATGGGCCATAGTGTTCATAGT
TACTTTACTCGTAGTAATCAACCGTACGTTTATGGGGATTATTCAATTTTCTTAGCAGAAATTGCCTCAACAACTAATGA
AAACTTATTAACGGAGTACTTACTAGCAACGGAGACTGATCCAGAAGTTCGGGCCTTTGTTTTAAACCGTTACTTAGACG
GCTTTAAAGGCACGATTTTCCGTCAAACTCAGTTTGCTGAATTTGAGCACTTTATCCATACGGAAGATGCTAAAGGTGTT
CCTTTAACAGCTGAGTATTTAAATACTTACTATGCTGATTTAAATGCTAAATATTACGGTGAAGCAGTCGCTCGTGACAG
TGAAATTGCTGTTGAGTGGGCCCGTATTCCTCATTTCTACTACAATCACTACGTGTACCAATATTCAACTGGTTTCTCAG
CAGCATCAACGTTAGCTGAAAAAATTTATACTGAAGAAACTGGCGCCTTAGATAAGTACTTAACTTATTTAAAAGCAGGT
AACAGTGATTTCCCAATTGAAGTTATGAAAAAAGCTGGCGTCGACATGACAGAAGCAACGTATATTGAAGAAGCGATGAA
AGTCTTTGAAGCTCGTTTAAATGAGTTTGAAACGCTAGTAGCTAGCTTTAAAAAATAA
ATGAGTGAAGCAAAACAATTACCAAAACGTGAGGAACTACTTGAAAAAGACACTTGGGATTTAACCAAAATCTTTCCAAA
TGATCAAGCTTTTGAAGACAGTTTCGCCGCATTTAATCAAGAACTAGTCGAGGCCAGCAGTTACCAAGGGACTTTAGCCA
CTGGAGCCGATGCTTTCTTAGCAGCCTTAACTTTTATTGGGGAAATTTCTCGGAAGTTTGAAGTTCTTTATGTCTATTCT
CATTTAAAAAATGACCAAGATACAGCGAATACGACGTACCAAGGCATGCACGCCAAAGCAGGGAGTTTAGGGGCACAAGC
TAATGAAGCCATTTCCTGGTTTGAACCAGAATTACTGCAATTAACTGATGAGCAAGTCTGGGCTTACTTTGATGAGAATT
CTGATTTAGAAATTTACCGTCATTTTGTCACTAATATTTTAAGTGACAGACCACACGTTTTATCAGAAAAAGAAGAAGCG
TTATTAGCTGGTGCAGGTGAAATTTTCGGCGCAGCTGGCAGAACTTTCTCAATTTTTAATAATGCGGATTTAAAATTCCC
GACAGTTAAAAATGACAAAGGTGAAACGATTCAATTGTCTCACGGTGTTTATGGTCAACTCTTAGAAAGCACTGACCCAC
AAGTCCGTGAAGAGGCTTTTAAAGGCATGTATAGTGTCTATGAGCAGTTCCAAAACACAATGGCGACTAACTTATCGAAT
CACGTTAAGACTCATAACTATCAAGCAACAGTTCGTAATTACAGCTCAGCTCGGGAAGCGTCATTAGCGAATAATCATAT
TCCAGAAGCTGTGTATGACACATTGTTACATGTTGTTGATAAAAACTTACCTTTGTTACATCGTTATGTGGCATTACGTA
AAGAGTTACTAGGAGTAGAGACGTTACACATGTATGACATGTATACACCGATTCTTGGGGAAGCACCGATTCGTTATTCA
TATGATGAAGCCCGTGAAAAAGCAATCACTGCTTTACAACCTCTAGGGGCTGAATATATGGCAGTCGTTGAAGAAGCCTT
TAGTAGCCGTTGGATCGATGTTGTTGAAAACCAAGGGAAGCGTAGTGGGGCTTACTCTTCAGGTTGTTACGATACAGCAC
CTTATATTTTAATGAACTGGCACGATAGCTTAGATCAATTGTATACTCTCGTCCATGAAATGGGCCATAGTGTTCATAGT
TACTTTACTCGTAGTAATCAACCGTACGTTTATGGGGATTATTCAATTTTCTTAGCAGAAATTGCCTCAACAACTAATGA
AAACTTATTAACGGAGTACTTACTAGCAACGGAGACTGATCCAGAAGTTCGGGCCTTTGTTTTAAACCGTTACTTAGACG
GCTTTAAAGGCACGATTTTCCGTCAAACTCAGTTTGCTGAATTTGAGCACTTTATCCATACGGAAGATGCTAAAGGTGTT
CCTTTAACAGCTGAGTATTTAAATACTTACTATGCTGATTTAAATGCTAAATATTACGGTGAAGCAGTCGCTCGTGACAG
TGAAATTGCTGTTGAGTGGGCCCGTATTCCTCATTTCTACTACAATCACTACGTGTACCAATATTCAACTGGTTTCTCAG
CAGCATCAACGTTAGCTGAAAAAATTTATACTGAAGAAACTGGCGCCTTAGATAAGTACTTAACTTATTTAAAAGCAGGT
AACAGTGATTTCCCAATTGAAGTTATGAAAAAAGCTGGCGTCGACATGACAGAAGCAACGTATATTGAAGAAGCGATGAA
AGTCTTTGAAGCTCGTTTAAATGAGTTTGAAACGCTAGTAGCTAGCTTTAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
53.469 |
97.686 |
0.522 |