Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ACLIMH_RS06505 | Genome accession | NZ_CP177046 |
| Coordinates | 1254780..1255103 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578878.1 | Uniprot ID | A0A6L7H7A6 |
| Organism | Bacillus thuringiensis strain MPB12 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1249780..1260103
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLIMH_RS06480 (ACLIMH_06480) | - | 1250053..1251339 (+) | 1287 | WP_341392056.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| ACLIMH_RS06485 (ACLIMH_06485) | sipW | 1251530..1252099 (+) | 570 | WP_000767792.1 | signal peptidase I SipW | - |
| ACLIMH_RS06490 (ACLIMH_06490) | - | 1252160..1252747 (+) | 588 | WP_000172852.1 | CalY family protein | - |
| ACLIMH_RS06495 (ACLIMH_06495) | - | 1252882..1253724 (+) | 843 | WP_342377625.1 | DUF4047 domain-containing protein | - |
| ACLIMH_RS06500 (ACLIMH_06500) | calY | 1254111..1254704 (+) | 594 | WP_000053708.1 | biofilm matrix protein CalY | - |
| ACLIMH_RS06505 (ACLIMH_06505) | sinR | 1254780..1255103 (-) | 324 | WP_000578878.1 | helix-turn-helix domain-containing protein | Regulator |
| ACLIMH_RS06510 (ACLIMH_06510) | - | 1255183..1255317 (-) | 135 | WP_000276214.1 | anti-repressor SinI family protein | - |
| ACLIMH_RS06515 (ACLIMH_06515) | inhA1 | 1255661..1258048 (+) | 2388 | WP_411469986.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| ACLIMH_RS06520 (ACLIMH_06520) | - | 1258220..1259587 (+) | 1368 | WP_000116794.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12319.17 Da Isoelectric Point: 9.6244
>NTDB_id=1085258 ACLIMH_RS06505 WP_000578878.1 1254780..1255103(-) (sinR) [Bacillus thuringiensis strain MPB12]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=1085258 ACLIMH_RS06505 WP_000578878.1 1254780..1255103(-) (sinR) [Bacillus thuringiensis strain MPB12]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |