Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACLIMH_RS05910 Genome accession   NZ_CP177046
Coordinates   1140247..1140423 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus thuringiensis strain MPB12     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1135247..1145423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLIMH_RS05890 (ACLIMH_05890) clpB 1135584..1138184 (+) 2601 WP_139872419.1 ATP-dependent chaperone ClpB -
  ACLIMH_RS05895 (ACLIMH_05895) - 1138218..1138400 (-) 183 WP_001211116.1 YjzD family protein -
  ACLIMH_RS05900 (ACLIMH_05900) - 1138557..1139291 (+) 735 WP_000028701.1 hydrolase -
  ACLIMH_RS05905 (ACLIMH_05905) - 1139321..1140193 (+) 873 WP_033668777.1 NAD-dependent epimerase/dehydratase family protein -
  ACLIMH_RS05910 (ACLIMH_05910) comZ 1140247..1140423 (+) 177 WP_009879752.1 ComZ family protein Regulator
  ACLIMH_RS05915 (ACLIMH_05915) fabH 1140814..1141746 (+) 933 WP_001100536.1 beta-ketoacyl-ACP synthase III -
  ACLIMH_RS05920 (ACLIMH_05920) fabF 1141778..1143016 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  ACLIMH_RS05925 (ACLIMH_05925) - 1143123..1143911 (+) 789 WP_139872418.1 DUF2268 domain-containing protein -
  ACLIMH_RS05930 (ACLIMH_05930) - 1144055..1144801 (+) 747 WP_000966134.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=1085253 ACLIMH_RS05910 WP_009879752.1 1140247..1140423(+) (comZ) [Bacillus thuringiensis strain MPB12]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=1085253 ACLIMH_RS05910 WP_009879752.1 1140247..1140423(+) (comZ) [Bacillus thuringiensis strain MPB12]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment