Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ACLIMH_RS00220 | Genome accession | NZ_CP177046 |
| Coordinates | 40424..40708 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus thuringiensis strain MPB12 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 35424..45708
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLIMH_RS00185 (ACLIMH_00185) | tmk | 35578..36204 (+) | 627 | WP_000677237.1 | dTMP kinase | - |
| ACLIMH_RS00190 (ACLIMH_00190) | holB | 36240..37223 (+) | 984 | WP_000169571.1 | DNA polymerase III subunit delta' | - |
| ACLIMH_RS00195 (ACLIMH_00195) | - | 37229..38056 (+) | 828 | WP_000272429.1 | stage 0 sporulation family protein | - |
| ACLIMH_RS00200 (ACLIMH_00200) | yabA | 38071..38421 (+) | 351 | WP_000412056.1 | DNA replication initiation control protein YabA | - |
| ACLIMH_RS00205 (ACLIMH_00205) | - | 38542..39282 (+) | 741 | WP_001055361.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ACLIMH_RS00210 (ACLIMH_00210) | - | 39269..39559 (+) | 291 | WP_000414342.1 | GIY-YIG nuclease family protein | - |
| ACLIMH_RS00215 (ACLIMH_00215) | rsmI | 39528..40403 (+) | 876 | WP_411469839.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ACLIMH_RS00220 (ACLIMH_00220) | abrB | 40424..40708 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| ACLIMH_RS00225 (ACLIMH_00225) | metG | 41199..43181 (+) | 1983 | WP_000134150.1 | methionine--tRNA ligase | - |
| ACLIMH_RS00230 (ACLIMH_00230) | - | 43347..44114 (+) | 768 | WP_411469840.1 | TatD family hydrolase | - |
| ACLIMH_RS00235 (ACLIMH_00235) | rnmV | 44329..44886 (+) | 558 | WP_000692830.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=1085242 ACLIMH_RS00220 WP_000843036.1 40424..40708(-) (abrB) [Bacillus thuringiensis strain MPB12]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=1085242 ACLIMH_RS00220 WP_000843036.1 40424..40708(-) (abrB) [Bacillus thuringiensis strain MPB12]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |