Detailed information NTG1085079

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: ACLIMA_RS19825
• Genome accession: NZ_CP177039
• Coordinates: 3734293..3735027 (-)
• Length: 244 a.a.
• NCBI ID: WP_011198352.1
• Uniprot ID: A0A415J866
• Organism: Bacillus licheniformis strain MPB04
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3729293..3740027

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLIMA_RS19790 (ACLIMA_19790)	fliW	3729444..3729875 (-)	432	WP_011198351.1	flagellar assembly protein FliW	-
ACLIMA_RS19795 (ACLIMA_19795)	-	3729897..3730463 (-)	567	WP_003185702.1	DUF6470 family protein	-
ACLIMA_RS19800 (ACLIMA_19800)	flgL	3730513..3731424 (-)	912	WP_003185705.1	flagellar hook-associated protein FlgL	-
ACLIMA_RS19805 (ACLIMA_19805)	flgK	3731435..3732958 (-)	1524	WP_003185709.1	flagellar hook-associated protein FlgK	-
ACLIMA_RS19810 (ACLIMA_19810)	-	3732974..3733450 (-)	477	WP_003185711.1	flagellar protein FlgN	-
ACLIMA_RS19815 (ACLIMA_19815)	flgM	3733469..3733735 (-)	267	WP_003185713.1	flagellar biosynthesis anti-sigma factor FlgM	-
ACLIMA_RS19820 (ACLIMA_19820)	-	3733815..3734234 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
ACLIMA_RS19825 (ACLIMA_19825)	comFC	3734293..3735027 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
ACLIMA_RS19830 (ACLIMA_19830)	-	3734984..3735268 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
ACLIMA_RS19835 (ACLIMA_19835)	comFA	3735323..3736717 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
ACLIMA_RS19840 (ACLIMA_19840)	-	3736838..3737680 (-)	843	WP_003185726.1	DegV family protein	-
ACLIMA_RS19845 (ACLIMA_19845)	degU	3737800..3738489 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
ACLIMA_RS19850 (ACLIMA_19850)	degS	3738571..3739728 (-)	1158	WP_003185733.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 244 a.a.
• Molecular weight: 27811.22 Da
• Isoelectric Point: 9.4827

>NTDB_id=1085079 ACLIMA_RS19825 WP_011198352.1 3734293..3735027(-) (comFC) [Bacillus licheniformis strain MPB04]
MKTRFAQAIEEGGNKLNCLICAAPLLHSLSWHSFFFLRSEEKICRECKENFIEIKGTVCPKCGRPQGSEELCGDCAKWEA
NPLTRSLLRQNRSVYLYNTFMKEVLARFKFRGDAELVFAFAPSFISAFQQYFRRSPSVLVPIPLSEERKAERGFNQAERL
ASLLQIPVIHPLIRIENEKQSKKSRKERIKPKTVFRTEKGSVKNLDVILIDDLYTTGATLHHAADCLMTSGEAKSVSSYT
LIRS

Nucleotide

• Length: 735 bp

>NTDB_id=1085079 ACLIMA_RS19825 WP_011198352.1 3734293..3735027(-) (comFC) [Bacillus licheniformis strain MPB04]
ATGAAAACCCGCTTTGCGCAAGCAATCGAAGAGGGAGGGAATAAACTGAATTGTTTAATTTGTGCAGCGCCTCTTTTACA
TTCTCTCTCATGGCATTCTTTTTTCTTTTTACGATCAGAAGAGAAAATATGCAGGGAATGTAAAGAGAACTTTATCGAGA
TCAAAGGAACCGTATGCCCTAAGTGCGGACGGCCACAGGGGAGCGAAGAGCTGTGCGGTGACTGCGCAAAATGGGAGGCC
AATCCGTTAACCCGCTCTCTTTTGAGGCAAAACCGCTCTGTTTATCTCTACAATACTTTCATGAAAGAAGTCCTTGCCCG
TTTTAAGTTCAGAGGTGATGCTGAACTGGTCTTCGCTTTTGCCCCTTCATTTATCAGCGCTTTTCAACAATACTTCCGCC
GCAGCCCGTCTGTTTTAGTTCCGATACCTCTCAGTGAAGAACGTAAAGCGGAGAGGGGATTTAATCAGGCGGAGCGTCTT
GCTTCCTTATTACAAATACCCGTTATTCATCCCTTGATCAGAATCGAAAATGAAAAACAATCCAAAAAAAGCAGGAAAGA
GCGAATTAAGCCAAAAACCGTTTTTAGAACCGAAAAGGGGTCAGTAAAGAATCTGGATGTCATATTGATTGACGACTTGT
ATACGACAGGAGCGACCCTTCATCATGCCGCTGATTGCCTGATGACATCCGGAGAAGCAAAATCTGTATCATCATATACA
TTAATTAGAAGCTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (151-242)

• Double zinc ribbon domain (DZR_2) (17-76)

3D structure

• AlphaFold DB: A0A415J866

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	52.321	97.131	0.508