Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ACLIMA_RS10125 | Genome accession | NZ_CP177039 |
| Coordinates | 1951175..1951603 (+) | Length | 142 a.a. |
| NCBI ID | WP_003182220.1 | Uniprot ID | A0A1Y0YFI7 |
| Organism | Bacillus licheniformis strain MPB04 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 1946175..1956603
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLIMA_RS10095 (ACLIMA_10095) | - | 1946358..1946966 (+) | 609 | WP_009328237.1 | flavin reductase family protein | - |
| ACLIMA_RS10100 (ACLIMA_10100) | wrbA | 1947167..1947778 (+) | 612 | WP_003182210.1 | NAD(P)H:quinone oxidoreductase | - |
| ACLIMA_RS10105 (ACLIMA_10105) | - | 1948099..1948239 (+) | 141 | WP_003182211.1 | hypothetical protein | - |
| ACLIMA_RS10110 (ACLIMA_10110) | - | 1948232..1949065 (+) | 834 | WP_003182213.1 | prohibitin family protein | - |
| ACLIMA_RS10115 (ACLIMA_10115) | - | 1949156..1949917 (+) | 762 | WP_003182215.1 | hypothetical protein | - |
| ACLIMA_RS10120 (ACLIMA_10120) | - | 1949977..1950816 (+) | 840 | WP_003182218.1 | thymidylate synthase | - |
| ACLIMA_RS10125 (ACLIMA_10125) | nucA/comI | 1951175..1951603 (+) | 429 | WP_003182220.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| ACLIMA_RS10130 (ACLIMA_10130) | lexA | 1951799..1952422 (-) | 624 | WP_003182222.1 | transcriptional repressor LexA | - |
| ACLIMA_RS10135 (ACLIMA_10135) | yneA | 1952575..1952886 (+) | 312 | WP_003182225.1 | cell division suppressor protein YneA | - |
| ACLIMA_RS10140 (ACLIMA_10140) | - | 1952905..1953552 (+) | 648 | WP_003182227.1 | recombinase family protein | - |
| ACLIMA_RS10145 (ACLIMA_10145) | - | 1953618..1953851 (+) | 234 | WP_003182231.1 | DUF896 domain-containing protein | - |
| ACLIMA_RS10150 (ACLIMA_10150) | tkt | 1954018..1956021 (+) | 2004 | WP_009328229.1 | transketolase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15332.29 Da Isoelectric Point: 7.8987
>NTDB_id=1085053 ACLIMA_RS10125 WP_003182220.1 1951175..1951603(+) (nucA/comI) [Bacillus licheniformis strain MPB04]
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ
Nucleotide
Download Length: 429 bp
>NTDB_id=1085053 ACLIMA_RS10125 WP_003182220.1 1951175..1951603(+) (nucA/comI) [Bacillus licheniformis strain MPB04]
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCGGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCGGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
58.73 |
88.732 |
0.521 |