Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACLIMA_RS06225 Genome accession   NZ_CP177039
Coordinates   1233596..1233766 (+) Length   56 a.a.
NCBI ID   WP_031314537.1    Uniprot ID   -
Organism   Bacillus licheniformis strain MPB04     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1228596..1238766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLIMA_RS06195 (ACLIMA_06195) - 1229464..1230276 (-) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -
  ACLIMA_RS06200 (ACLIMA_06200) - 1230458..1230637 (+) 180 WP_003180573.1 YjzC family protein -
  ACLIMA_RS06205 (ACLIMA_06205) - 1230708..1230902 (-) 195 WP_009328851.1 YjzD family protein -
  ACLIMA_RS06210 (ACLIMA_06210) - 1231134..1231868 (+) 735 WP_009328850.1 hypothetical protein -
  ACLIMA_RS06215 (ACLIMA_06215) - 1231955..1232530 (+) 576 WP_016885912.1 hypothetical protein -
  ACLIMA_RS06220 (ACLIMA_06220) med 1232617..1233570 (+) 954 WP_009328848.1 BMP family ABC transporter substrate-binding protein Regulator
  ACLIMA_RS06225 (ACLIMA_06225) comZ 1233596..1233766 (+) 171 WP_031314537.1 ComZ family protein Regulator
  ACLIMA_RS06230 (ACLIMA_06230) - 1233818..1234057 (-) 240 WP_009328847.1 hypothetical protein -
  ACLIMA_RS06235 (ACLIMA_06235) - 1234227..1235165 (+) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  ACLIMA_RS06240 (ACLIMA_06240) fabF 1235187..1236425 (+) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  ACLIMA_RS06245 (ACLIMA_06245) - 1236513..1237301 (+) 789 WP_009328844.1 DUF2268 domain-containing protein -
  ACLIMA_RS06250 (ACLIMA_06250) - 1237493..1238467 (+) 975 WP_009328843.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6274.27 Da        Isoelectric Point: 3.9646

>NTDB_id=1085036 ACLIMA_RS06225 WP_031314537.1 1233596..1233766(+) (comZ) [Bacillus licheniformis strain MPB04]
MEFLQIAMKYVPEAKEEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=1085036 ACLIMA_RS06225 WP_031314537.1 1233596..1233766(+) (comZ) [Bacillus licheniformis strain MPB04]
ATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGAAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACCTGTTTACAAAAGTGATGGCGGAAGCTTACGAGCTCGGTAAAGCGGACGCCGGTT
CTGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75

Multiple sequence alignment