Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   ACLIMC_RS06020 Genome accession   NZ_CP177035
Coordinates   1176690..1177373 (+) Length   227 a.a.
NCBI ID   WP_000350720.1    Uniprot ID   A0A0J1I2I3
Organism   Bacillus thuringiensis strain MPB08     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1171690..1182373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLIMC_RS06000 (ACLIMC_06000) - 1172773..1174419 (+) 1647 WP_000727257.1 peptide ABC transporter substrate-binding protein -
  ACLIMC_RS06005 (ACLIMC_06005) - 1174448..1174651 (-) 204 WP_000559980.1 hypothetical protein -
  ACLIMC_RS06010 (ACLIMC_06010) spx 1175244..1175639 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  ACLIMC_RS06015 (ACLIMC_06015) - 1175689..1176363 (-) 675 WP_000362609.1 TerC family protein -
  ACLIMC_RS06020 (ACLIMC_06020) mecA 1176690..1177373 (+) 684 WP_000350720.1 adaptor protein MecA Regulator
  ACLIMC_RS06025 (ACLIMC_06025) - 1177446..1178990 (+) 1545 WP_000799201.1 cardiolipin synthase -
  ACLIMC_RS06030 (ACLIMC_06030) - 1179072..1180316 (+) 1245 WP_131369526.1 competence protein CoiA -
  ACLIMC_RS06035 (ACLIMC_06035) pepF 1180367..1182193 (+) 1827 WP_000003393.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26994.06 Da        Isoelectric Point: 3.9822

>NTDB_id=1084986 ACLIMC_RS06020 WP_000350720.1 1176690..1177373(+) (mecA) [Bacillus thuringiensis strain MPB08]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=1084986 ACLIMC_RS06020 WP_000350720.1 1176690..1177373(+) (mecA) [Bacillus thuringiensis strain MPB08]
TTGGATATTGAAAGAATTAATGATCATACGATGAAGTTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAGGAAGAAATTGATCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0J1I2I3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment