Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACLIMC_RS05935 Genome accession   NZ_CP177035
Coordinates   1158213..1158389 (+) Length   58 a.a.
NCBI ID   WP_411501190.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain MPB08     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1153213..1163389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLIMC_RS05915 (ACLIMC_05915) clpB 1153550..1156150 (+) 2601 WP_087931422.1 ATP-dependent chaperone ClpB -
  ACLIMC_RS05920 (ACLIMC_05920) - 1156184..1156366 (-) 183 WP_001211116.1 YjzD family protein -
  ACLIMC_RS05925 (ACLIMC_05925) - 1156523..1157257 (+) 735 WP_000028701.1 hydrolase -
  ACLIMC_RS05930 (ACLIMC_05930) - 1157287..1158159 (+) 873 WP_033668777.1 NAD-dependent epimerase/dehydratase family protein -
  ACLIMC_RS05935 (ACLIMC_05935) comZ 1158213..1158389 (+) 177 WP_411501190.1 ComZ family protein Regulator
  ACLIMC_RS05940 (ACLIMC_05940) fabH 1158780..1159712 (+) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  ACLIMC_RS05945 (ACLIMC_05945) fabF 1159744..1160982 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  ACLIMC_RS05950 (ACLIMC_05950) - 1161089..1161877 (+) 789 WP_281102136.1 DUF2268 domain-containing protein -
  ACLIMC_RS05955 (ACLIMC_05955) - 1162021..1162767 (+) 747 WP_000966134.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6604.75 Da        Isoelectric Point: 4.3010

>NTDB_id=1084983 ACLIMC_RS05935 WP_411501190.1 1158213..1158389(+) (comZ) [Bacillus thuringiensis strain MPB08]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKVQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=1084983 ACLIMC_RS05935 WP_411501190.1 1158213..1158389(+) (comZ) [Bacillus thuringiensis strain MPB08]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGTTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment