Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACLAIY_RS21700 Genome accession   NZ_CP176969
Coordinates   4488965..4489561 (+) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain LAhvKp234     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4483965..4494561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLAIY_RS21680 (ACLAIY_21680) - 4484156..4485913 (-) 1758 WP_004147851.1 Lon protease family protein -
  ACLAIY_RS21685 (ACLAIY_21685) matP 4486099..4486551 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACLAIY_RS21690 (ACLAIY_21690) ompA 4486684..4487754 (-) 1071 WP_002898408.1 porin OmpA -
  ACLAIY_RS21695 (ACLAIY_21695) sulA 4488107..4488616 (-) 510 WP_411547757.1 SOS-induced cell division inhibitor SulA -
  ACLAIY_RS21700 (ACLAIY_21700) sxy/tfoX 4488965..4489561 (+) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACLAIY_RS21705 (ACLAIY_21705) yccS 4489575..4491710 (-) 2136 WP_004213263.1 YccS family putative transporter -
  ACLAIY_RS21710 (ACLAIY_21710) - 4491728..4492174 (-) 447 WP_002898425.1 YccF domain-containing protein -
  ACLAIY_RS21715 (ACLAIY_21715) helD 4492299..4494353 (+) 2055 WP_004213261.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1084505 ACLAIY_RS21700 WP_004150836.1 4488965..4489561(+) (sxy/tfoX) [Klebsiella pneumoniae strain LAhvKp234]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1084505 ACLAIY_RS21700 WP_004150836.1 4488965..4489561(+) (sxy/tfoX) [Klebsiella pneumoniae strain LAhvKp234]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAAGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment