Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACLAIT_RS24005 Genome accession   NZ_CP176957
Coordinates   4920698..4921294 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain LAhvKp186     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 4915698..4926294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLAIT_RS23990 (ACLAIT_23990) helD 4915906..4917960 (-) 2055 WP_004176653.1 DNA helicase IV -
  ACLAIT_RS23995 (ACLAIT_23995) - 4918085..4918531 (+) 447 WP_002898425.1 YccF domain-containing protein -
  ACLAIT_RS24000 (ACLAIT_24000) yccS 4918549..4920684 (+) 2136 WP_002898422.1 YccS family putative transporter -
  ACLAIT_RS24005 (ACLAIT_24005) sxy/tfoX 4920698..4921294 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  ACLAIT_RS24010 (ACLAIT_24010) sulA 4921643..4922152 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACLAIT_RS24015 (ACLAIT_24015) ompA 4922505..4923575 (+) 1071 WP_002898408.1 porin OmpA -
  ACLAIT_RS24020 (ACLAIT_24020) matP 4923707..4924159 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACLAIT_RS24025 (ACLAIT_24025) - 4924345..4926102 (+) 1758 WP_032429922.1 Lon protease family protein -

Sequence


Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=1084411 ACLAIT_RS24005 WP_004150836.1 4920698..4921294(-) (sxy/tfoX) [Klebsiella pneumoniae strain LAhvKp186]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1084411 ACLAIT_RS24005 WP_004150836.1 4920698..4921294(-) (sxy/tfoX) [Klebsiella pneumoniae strain LAhvKp186]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51


Multiple sequence alignment