Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACK99X_RS17730 Genome accession   NZ_CP176919
Coordinates   3761080..3761676 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain LAhvKp37     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 3756080..3766676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK99X_RS17705 (ACK99X_17705) - 3756272..3758029 (-) 1758 WP_014907886.1 Lon protease family protein -
  ACK99X_RS17710 (ACK99X_17710) matP 3758215..3758667 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  ACK99X_RS17715 (ACK99X_17715) ompA 3758799..3759869 (-) 1071 WP_002898408.1 porin OmpA -
  ACK99X_RS17720 (ACK99X_17720) sulA 3760222..3760731 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  ACK99X_RS17725 (ACK99X_17725) - 3760774..3760989 (-) 216 WP_009485781.1 hypothetical protein -
  ACK99X_RS17730 (ACK99X_17730) sxy/tfoX 3761080..3761676 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  ACK99X_RS17735 (ACK99X_17735) yccS 3761690..3763825 (-) 2136 WP_002898422.1 YccS family putative transporter -
  ACK99X_RS17740 (ACK99X_17740) - 3763843..3764289 (-) 447 WP_014907884.1 YccF domain-containing protein -
  ACK99X_RS17745 (ACK99X_17745) helD 3764414..3766468 (+) 2055 WP_014907883.1 DNA helicase IV -

Sequence


Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=1083989 ACK99X_RS17730 WP_004179217.1 3761080..3761676(+) (sxy/tfoX) [Klebsiella pneumoniae strain LAhvKp37]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1083989 ACK99X_RS17730 WP_004179217.1 3761080..3761676(+) (sxy/tfoX) [Klebsiella pneumoniae strain LAhvKp37]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTATTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51


Multiple sequence alignment