Detailed information NTG1083386

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: ACLINY_RS00220
• Genome accession: NZ_CP176864
• Coordinates: 40421..40705 (-)
• Length: 94 a.a.
• NCBI ID: WP_000843036.1
• Uniprot ID: A0A9W5VII1
• Organism: Bacillus thuringiensis strain MPB19
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 35421..45705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLINY_RS00185 (ACLINY_00185)	tmk	35575..36201 (+)	627	WP_000677237.1	dTMP kinase	-
ACLINY_RS00190 (ACLINY_00190)	holB	36237..37220 (+)	984	WP_149282534.1	DNA polymerase III subunit delta'	-
ACLINY_RS00195 (ACLINY_00195)	-	37226..38053 (+)	828	WP_000272429.1	stage 0 sporulation family protein	-
ACLINY_RS00200 (ACLINY_00200)	yabA	38068..38418 (+)	351	WP_000412056.1	DNA replication initiation control protein YabA	-
ACLINY_RS00205 (ACLINY_00205)	-	38539..39279 (+)	741	WP_001055361.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
ACLINY_RS00210 (ACLINY_00210)	-	39266..39556 (+)	291	WP_000414342.1	GIY-YIG nuclease family protein	-
ACLINY_RS00215 (ACLINY_00215)	rsmI	39525..40400 (+)	876	WP_000267808.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
ACLINY_RS00220 (ACLINY_00220)	abrB	40421..40705 (-)	285	WP_000843036.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
ACLINY_RS00225 (ACLINY_00225)	metG	41196..43178 (+)	1983	WP_000134147.1	methionine--tRNA ligase	-
ACLINY_RS00230 (ACLINY_00230)	-	43344..44111 (+)	768	WP_000895823.1	TatD family hydrolase	-
ACLINY_RS00235 (ACLINY_00235)	rnmV	44326..44883 (+)	558	WP_000692830.1	ribonuclease M5	-

Sequence

Protein

• Length: 94 a.a.
• Molecular weight: 10490.17 Da
• Isoelectric Point: 4.7174

>NTDB_id=1083386 ACLINY_RS00220 WP_000843036.1 40421..40705(-) (abrB) [Bacillus thuringiensis strain MPB19]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK

Nucleotide

• Length: 285 bp

>NTDB_id=1083386 ACLINY_RS00220 WP_000843036.1 40421..40705(-) (abrB) [Bacillus thuringiensis strain MPB19]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-89)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-50)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	85.106	100	0.851