Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ACLINZ_RS06445 | Genome accession | NZ_CP176860 |
| Coordinates | 1252059..1252382 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578878.1 | Uniprot ID | A0A6L7H7A6 |
| Organism | Bacillus thuringiensis strain MPB18 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1247059..1257382
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLINZ_RS06415 (ACLINZ_06415) | - | 1247310..1247630 (+) | 321 | WP_001074673.1 | helix-turn-helix domain-containing protein | - |
| ACLINZ_RS06420 (ACLINZ_06420) | - | 1247669..1248505 (+) | 837 | WP_230305710.1 | IS3 family transposase | - |
| ACLINZ_RS06425 (ACLINZ_06425) | sipW | 1248715..1249284 (+) | 570 | WP_411501194.1 | signal peptidase I SipW | - |
| ACLINZ_RS06430 (ACLINZ_06430) | - | 1249347..1249934 (+) | 588 | WP_000172840.1 | CalY family protein | - |
| ACLINZ_RS06435 (ACLINZ_06435) | - | 1250096..1250992 (+) | 897 | WP_000917470.1 | DUF4047 domain-containing protein | - |
| ACLINZ_RS06440 (ACLINZ_06440) | calY | 1251390..1251983 (+) | 594 | WP_000053731.1 | biofilm matrix protein CalY | - |
| ACLINZ_RS06445 (ACLINZ_06445) | sinR | 1252059..1252382 (-) | 324 | WP_000578878.1 | helix-turn-helix domain-containing protein | Regulator |
| ACLINZ_RS06450 (ACLINZ_06450) | - | 1252462..1252596 (-) | 135 | WP_000276214.1 | anti-repressor SinI family protein | - |
| ACLINZ_RS06455 (ACLINZ_06455) | inhA1 | 1252940..1255327 (+) | 2388 | WP_001035926.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| ACLINZ_RS06460 (ACLINZ_06460) | - | 1255499..1256866 (+) | 1368 | WP_000116799.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12319.17 Da Isoelectric Point: 9.6244
>NTDB_id=1083355 ACLINZ_RS06445 WP_000578878.1 1252059..1252382(-) (sinR) [Bacillus thuringiensis strain MPB18]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=1083355 ACLINZ_RS06445 WP_000578878.1 1252059..1252382(-) (sinR) [Bacillus thuringiensis strain MPB18]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCTGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCTGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAGAACCCTTCCATTCAGTTTCTTGAAAAGATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |