Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACLIN2_RS28270 Genome accession   NZ_CP176856
Coordinates   5652163..5653116 (+) Length   317 a.a.
NCBI ID   WP_400583562.1    Uniprot ID   -
Organism   Brevibacillus centrosporus strain MPB16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5647163..5658116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLIN2_RS28260 (ACLIN2_28260) - 5649772..5650131 (-) 360 WP_122926324.1 response regulator -
  ACLIN2_RS28265 (ACLIN2_28265) - 5650355..5651746 (+) 1392 WP_411502797.1 MATE family efflux transporter -
  ACLIN2_RS28270 (ACLIN2_28270) ceuB 5652163..5653116 (+) 954 WP_400583562.1 ABC transporter permease Machinery gene
  ACLIN2_RS28275 (ACLIN2_28275) - 5653113..5654057 (+) 945 WP_411502798.1 iron chelate uptake ABC transporter family permease subunit -
  ACLIN2_RS28280 (ACLIN2_28280) - 5654051..5654809 (+) 759 WP_411502799.1 ABC transporter ATP-binding protein -
  ACLIN2_RS28285 (ACLIN2_28285) - 5654923..5655900 (+) 978 WP_411502800.1 siderophore ABC transporter substrate-binding protein -
  ACLIN2_RS28290 (ACLIN2_28290) - 5656126..5656425 (-) 300 WP_122926318.1 YxcD family protein -
  ACLIN2_RS28295 (ACLIN2_28295) - 5656413..5656859 (-) 447 WP_092271896.1 hypothetical protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35023.43 Da        Isoelectric Point: 9.6659

>NTDB_id=1083306 ACLIN2_RS28270 WP_400583562.1 5652163..5653116(+) (ceuB) [Brevibacillus centrosporus strain MPB16]
MKKRYLVIALILLSIASLFIGVKDISPLELFDLAEEKTQVMWISRVPRLISIIIAGVSMSIVGLIMQQLTRNKFVSPTTA
GTEDSVRFGILVSMMLFTDASPLLKMLVAFVFALLGTFVFMKILDKVKYKDSIFIPLVGLMFGNIIGSITTFFAYKYDLI
QNMSAWLHGDFSSVLKGSYELLYVSIPLVIIAYLFANKFTIAGMGEEFAINLGLNYKQVVNIGLCIVAMVTSVVILTVGT
IPFLGLIIPNIVTLYLGDNLKKSLAHTALLGAVFVLVCDILGRLIIFPYEISIGLMVGVIGSGIFIFLLMRRKAYDR

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1083306 ACLIN2_RS28270 WP_400583562.1 5652163..5653116(+) (ceuB) [Brevibacillus centrosporus strain MPB16]
ATGAAGAAGAGATATTTAGTTATAGCACTCATCCTGCTGTCGATAGCTTCCTTGTTTATTGGTGTGAAGGACATTTCTCC
GCTGGAGCTGTTCGATCTCGCGGAAGAAAAGACGCAGGTAATGTGGATCAGTAGAGTCCCACGTTTGATCAGTATCATCA
TCGCTGGTGTCAGCATGAGTATCGTAGGTTTGATCATGCAGCAGCTGACGAGGAACAAATTCGTATCGCCTACCACGGCC
GGTACGGAGGATTCTGTCCGATTCGGTATCTTGGTCTCGATGATGCTGTTCACAGACGCGAGCCCACTGCTGAAGATGCT
GGTAGCTTTCGTGTTTGCTTTGCTGGGTACGTTTGTTTTTATGAAGATTCTCGATAAGGTCAAGTACAAGGATTCGATTT
TCATTCCATTGGTTGGTTTGATGTTTGGGAATATCATCGGTTCCATCACGACGTTCTTCGCCTACAAGTACGACCTTATT
CAAAATATGTCTGCGTGGCTGCATGGGGATTTTTCCTCGGTTTTGAAAGGCAGCTACGAACTGCTGTATGTCAGTATTCC
GCTCGTCATCATCGCGTACCTGTTTGCCAACAAGTTCACGATTGCAGGCATGGGTGAGGAATTCGCCATCAACTTGGGTC
TGAACTATAAGCAGGTAGTCAATATCGGGCTTTGTATTGTAGCTATGGTGACCTCCGTCGTGATTCTGACGGTCGGGACG
ATTCCGTTTTTAGGCTTGATTATCCCTAACATTGTGACGTTGTACCTGGGGGATAACCTGAAAAAAAGCTTGGCCCACAC
TGCTCTCTTAGGTGCCGTATTCGTACTGGTCTGCGACATATTGGGACGCCTGATCATCTTCCCTTACGAAATATCCATCG
GATTGATGGTGGGAGTAATCGGTAGCGGGATCTTCATTTTCCTACTTATGAGAAGAAAGGCGTATGACCGATGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

55.449

98.423

0.546

Multiple sequence alignment