Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACK8N4_RS26085 | Genome accession | NZ_CP176811 |
| Coordinates | 5554722..5555279 (+) | Length | 185 a.a. |
| NCBI ID | WP_003125211.1 | Uniprot ID | A0A6A9K9C7 |
| Organism | Pseudomonas aeruginosa strain DG-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5549722..5560279
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8N4_RS26065 (ACK8N4_26065) | pilR | 5550998..5552335 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| ACK8N4_RS26070 (ACK8N4_26070) | thiO | 5552381..5553475 (-) | 1095 | WP_083557131.1 | glycine oxidase ThiO | - |
| ACK8N4_RS26075 (ACK8N4_26075) | - | 5553610..5554119 (+) | 510 | WP_083557114.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACK8N4_RS26080 (ACK8N4_26080) | - | 5554225..5554731 (+) | 507 | WP_003134935.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACK8N4_RS26085 (ACK8N4_26085) | pilV | 5554722..5555279 (+) | 558 | WP_003125211.1 | type 4a pilus minor pilin PilV | Machinery gene |
| ACK8N4_RS26090 (ACK8N4_26090) | pilW | 5555276..5556100 (+) | 825 | WP_033976380.1 | type 4a pilus minor pilin PilW | - |
| ACK8N4_RS26095 (ACK8N4_26095) | pilX | 5556097..5556684 (+) | 588 | WP_033972921.1 | type 4a pilus minor pilin PilX | - |
| ACK8N4_RS26100 (ACK8N4_26100) | pilY1 | 5556696..5560187 (+) | 3492 | WP_019726897.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20087.19 Da Isoelectric Point: 8.2171
>NTDB_id=1083231 ACK8N4_RS26085 WP_003125211.1 5554722..5555279(+) (pilV) [Pseudomonas aeruginosa strain DG-1]
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1083231 ACK8N4_RS26085 WP_003125211.1 5554722..5555279(+) (pilV) [Pseudomonas aeruginosa strain DG-1]
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGTGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGTGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |