Detailed information NTG1083034

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ACK3B6_RS19415
• Genome accession: NZ_CP176792
• Coordinates: 3796519..3797664 (+)
• Length: 381 a.a.
• NCBI ID: WP_024123222.1
• Uniprot ID: A0A9Q6ABW7
• Organism: Bacillus halotolerans strain BCP32
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3791519..3802664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK3B6_RS19390 (ACK3B6_19390)	-	3792445..3793722 (+)	1278	WP_202852772.1	M16 family metallopeptidase	-
ACK3B6_RS19395 (ACK3B6_19395)	-	3793719..3794420 (+)	702	WP_105990792.1	bacteriocin biosynthesis protein AlbG	-
ACK3B6_RS19400 (ACK3B6_19400)	-	3794427..3794521 (-)	95	Protein_3762	hypothetical protein	-
ACK3B6_RS19405 (ACK3B6_19405)	-	3794546..3794740 (-)	195	Protein_3763	YncE family protein	-
ACK3B6_RS19410 (ACK3B6_19410)	-	3794932..3796290 (-)	1359	WP_202852773.1	YncE family protein	-
ACK3B6_RS19415 (ACK3B6_19415)	rapF	3796519..3797664 (+)	1146	WP_024123222.1	tetratricopeptide repeat protein	Regulator
ACK3B6_RS19420 (ACK3B6_19420)	-	3797648..3797767 (+)	120	WP_024123223.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
ACK3B6_RS19425 (ACK3B6_19425)	speB	3797873..3798745 (-)	873	WP_105954411.1	agmatinase	-
ACK3B6_RS19430 (ACK3B6_19430)	speE	3798806..3799636 (-)	831	WP_059335162.1	spermidine synthase	-
ACK3B6_RS19435 (ACK3B6_19435)	-	3799837..3801912 (+)	2076	WP_202852774.1	transglycosylase domain-containing protein	-
ACK3B6_RS19440 (ACK3B6_19440)	-	3801945..3802367 (-)	423	WP_202852775.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45602.17 Da
• Isoelectric Point: 4.8579

>NTDB_id=1083034 ACK3B6_RS19415 WP_024123222.1 3796519..3797664(+) (rapF) [Bacillus halotolerans strain BCP32]
MTSVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLENMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDRREYILAIQFFKKAESKLTFVKDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYNEQTTYDIRMIQCQSLFGANFLDLKQYDKAIAHFQKAYTLAEAAQQPQLMGRTLYNIALCKQNQHSLES
AIEYVKKSIHVFEESKMLPSLPQAFFLITQIYFKLGKIDNACEYHKKGREYSIAAGDTVYLMEFEFLESLYLSGPDEEAI
EKCFVFLESKMMYADIEDFALDVAKYYHQQENYKKASTYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1083034 ACK3B6_RS19415 WP_024123222.1 3796519..3797664(+) (rapF) [Bacillus halotolerans strain BCP32]
GTGACAAGTGTCATATCTTCTTCTTCCGTTGGAGAAAAGATTAATGAATGGTATATGTACATACGCCGATTCAGCATACC
GGATGCGGAATATTTACGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGACCAGGATCTTCATTTGTATTATT
CACTGATGGAATTCCGGCACAATCTGATGCTTGAGTATCTTGAACCGTTAGAAAACATGCGGATAGAGGAACAGCCGCGA
CTGTCCGATTTGCTGCTTGAAATCGATAAAAAACAGGCTCGTTTAACCGGACTGCTTGAATACTACTTTAATTTCTTCAG
AGGTATGTACGAACTGGACCGCCGGGAATATATATTAGCCATTCAATTTTTTAAAAAAGCAGAGAGCAAACTGACTTTTG
TGAAAGATAAAATTGATAAAGCTGAGTTCTTTTTCAAAATGTCAGAAGTTTATTACTATATGAAGCAAACTTATGTGTCC
ATGGACTATGCACGTCAAGCCTTTGAAATATACAATGAACAAACTACATATGATATCAGAATGATTCAATGCCAATCCCT
GTTTGGAGCTAACTTTTTGGATCTGAAACAGTATGATAAAGCAATTGCTCATTTCCAAAAAGCTTATACACTTGCTGAGG
CGGCACAGCAGCCGCAGCTAATGGGAAGAACGCTTTATAATATTGCACTTTGCAAGCAAAACCAACACAGTCTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCATGTATTTGAAGAATCGAAAATGCTTCCTTCACTGCCACAAGCTTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGTAAGATTGATAACGCTTGTGAATATCATAAAAAAGGAAGAGAATATTCAATAG
CTGCCGGAGACACTGTGTACTTAATGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCTGATGAAGAAGCAATA
GAAAAATGTTTTGTTTTCCTTGAAAGTAAAATGATGTATGCTGATATTGAGGACTTTGCACTCGATGTTGCTAAGTATTA
TCATCAGCAGGAAAATTACAAAAAAGCATCTACTTATTTTTTAAAGGTTGAAGAAGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_8) (193-213)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	80.052	100	0.801
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57