Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACK3B6_RS06300 Genome accession   NZ_CP176792
Coordinates   1232446..1233597 (+) Length   383 a.a.
NCBI ID   WP_416043087.1    Uniprot ID   -
Organism   Bacillus halotolerans strain BCP32     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1227446..1238597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK3B6_RS06270 (ACK3B6_06270) - 1228115..1229332 (+) 1218 WP_416043150.1 MFS transporter -
  ACK3B6_RS06275 (ACK3B6_06275) - 1229498..1230076 (+) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  ACK3B6_RS06280 (ACK3B6_06280) spx 1230256..1230651 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  ACK3B6_RS06285 (ACK3B6_06285) - 1230697..1231353 (-) 657 WP_044156385.1 TerC family protein -
  ACK3B6_RS06290 (ACK3B6_06290) - 1231540..1231665 (+) 126 WP_120698858.1 hypothetical protein -
  ACK3B6_RS06295 (ACK3B6_06295) mecA 1231632..1232288 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  ACK3B6_RS06300 (ACK3B6_06300) coiA 1232446..1233597 (+) 1152 WP_416043087.1 competence protein CoiA family protein Machinery gene
  ACK3B6_RS06305 (ACK3B6_06305) pepF 1233827..1235656 (+) 1830 WP_181185656.1 oligoendopeptidase F -
  ACK3B6_RS06310 (ACK3B6_06310) - 1235692..1235859 (-) 168 WP_202853255.1 hypothetical protein -
  ACK3B6_RS06315 (ACK3B6_06315) spxH 1236173..1237072 (-) 900 WP_024120926.1 protease adaptor protein SpxH -
  ACK3B6_RS06320 (ACK3B6_06320) - 1237069..1237467 (-) 399 WP_010333756.1 thiol management oxidoreductase -
  ACK3B6_RS06325 (ACK3B6_06325) - 1237724..1238455 (-) 732 WP_320443609.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44706.81 Da        Isoelectric Point: 9.8344

>NTDB_id=1082985 ACK3B6_RS06300 WP_416043087.1 1232446..1233597(+) (coiA) [Bacillus halotolerans strain BCP32]
MFSAVTEDGQVFHLIGTQRREQLKQTRFFCPVCAEELDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQKASPLLEPYVKEIKQRPDILAKVKGDTLAVEYQCATLAPDVFQKRTAGFKQAGMIPQWILGGSRLKRTSSSFYQLSAF
HWQFINASPNSDLLCYCPETHSFLRLSRMIPFYTTHFYCSVQTIPIRQAAAEDLFFTEPDSSFKQSDWTGAILRFRRKTH
RFLSKDMNRIRLLFYEKRQTPLSFLPTEVFVPVKKGAVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAVLQHCKIHIHKK
NILLRGVYRDQDFIEAVKQYIEFLCKKGFLRETQKEVYVLNQPAKRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1082985 ACK3B6_RS06300 WP_416043087.1 1232446..1233597(+) (coiA) [Bacillus halotolerans strain BCP32]
TTGTTTAGTGCTGTGACAGAAGACGGCCAAGTGTTTCACCTCATAGGTACGCAGAGGAGAGAACAATTAAAGCAGACCAG
GTTTTTCTGCCCGGTGTGTGCAGAGGAGCTCGATGTGAAGCTAGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTTTATGTATGGCTGAAA
ACGCAAAAGGCTTCCCCGCTCTTAGAGCCGTACGTGAAAGAGATTAAACAAAGGCCCGACATCTTGGCAAAAGTAAAGGG
GGATACGCTTGCAGTTGAATACCAATGCGCGACTCTCGCTCCAGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGAATGATACCGCAGTGGATTCTTGGGGGCAGCCGCTTAAAACGGACATCATCATCCTTTTACCAGCTGTCCGCTTTC
CATTGGCAGTTTATCAATGCCAGTCCGAACAGTGATCTGTTATGTTACTGCCCCGAAACACATTCTTTCCTGAGGCTCAG
CCGCATGATCCCGTTTTACACAACCCATTTTTACTGCTCCGTTCAAACGATTCCAATCCGCCAGGCAGCGGCTGAAGATT
TATTTTTCACTGAACCAGATTCGTCGTTTAAGCAATCAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGGTTTCTCTCTAAAGATATGAATCGGATCAGGCTTCTGTTTTATGAAAAACGGCAAACACCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTAAAGAAAGGAGCTGTTTTTAAGAGCCCCGTTTTTGTATGGCAGGGCTATCTTTATCTGTTTA
TTACGGATCTTGGATATAAACATGCGCCCATTCGCTTTTCAGCCGTTTTGCAGCACTGCAAAATACACATTCATAAAAAG
AACATTCTGCTAAGAGGCGTATACAGGGATCAGGATTTCATTGAGGCGGTTAAACAGTACATTGAGTTTTTGTGCAAGAA
GGGATTTTTGAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCCGCAAAGCGCAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.871

97.389

0.739


Multiple sequence alignment