Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   ACK3B6_RS05720 Genome accession   NZ_CP176792
Coordinates   1117835..1118413 (+) Length   192 a.a.
NCBI ID   WP_024120818.1    Uniprot ID   A0A7G7UAM4
Organism   Bacillus halotolerans strain BCP32     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1112835..1123413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK3B6_RS05695 (ACK3B6_05695) - 1113343..1113858 (-) 516 WP_369810943.1 methyl-accepting chemotaxis protein -
  ACK3B6_RS05700 (ACK3B6_05700) - 1114147..1114524 (-) 378 Protein_1056 protoglobin domain-containing protein -
  ACK3B6_RS05705 (ACK3B6_05705) - 1114782..1116311 (-) 1530 WP_202852680.1 FAD-dependent oxidoreductase -
  ACK3B6_RS05710 (ACK3B6_05710) - 1116423..1117280 (+) 858 WP_105955339.1 SDR family oxidoreductase -
  ACK3B6_RS05715 (ACK3B6_05715) - 1117309..1117542 (-) 234 WP_010333637.1 IDEAL domain-containing protein -
  ACK3B6_RS05720 (ACK3B6_05720) comK 1117835..1118413 (+) 579 WP_024120818.1 competence transcription factor ComK Regulator
  ACK3B6_RS05725 (ACK3B6_05725) - 1118459..1119358 (-) 900 WP_202656869.1 SDR family oxidoreductase -
  ACK3B6_RS05730 (ACK3B6_05730) - 1119570..1119839 (+) 270 WP_010333640.1 excalibur calcium-binding domain-containing protein -
  ACK3B6_RS05735 (ACK3B6_05735) - 1119880..1121349 (-) 1470 WP_202852679.1 sodium:solute symporter family protein -
  ACK3B6_RS05740 (ACK3B6_05740) - 1121346..1121546 (-) 201 WP_010333642.1 DUF3311 domain-containing protein -
  ACK3B6_RS05745 (ACK3B6_05745) - 1121772..1122134 (-) 363 WP_105953788.1 hypothetical protein -
  ACK3B6_RS05750 (ACK3B6_05750) - 1122290..1122910 (+) 621 WP_105953787.1 TVP38/TMEM64 family protein -
  ACK3B6_RS05755 (ACK3B6_05755) lepB 1122912..1123412 (+) 501 WP_105953786.1 signal peptidase I -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22430.74 Da        Isoelectric Point: 7.6610

>NTDB_id=1082977 ACK3B6_RS05720 WP_024120818.1 1117835..1118413(+) (comK) [Bacillus halotolerans strain BCP32]
MSQKTDAPLESYEVNSATIAVLPEEIDGKICSKIIEKDCMFYVSMKPLQIVDRSCRFFGSSYAGRKAGTYEVTKISHKPP
IMVDPSNQIFLFPTLSSTRPQCGWISHVHVKEFKPTEFDDTEVTFSNGKTMELPVSCNSFENQVYRTAWLRTKFQDRIEH
RVPKRQEFMLYPKEERTKMIYDFILRELGERY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=1082977 ACK3B6_RS05720 WP_024120818.1 1117835..1118413(+) (comK) [Bacillus halotolerans strain BCP32]
ATGAGTCAGAAAACTGACGCACCATTAGAATCGTATGAAGTAAACAGCGCAACAATTGCCGTTTTGCCAGAAGAAATCGA
CGGCAAAATCTGTTCAAAAATCATTGAAAAAGACTGTATGTTTTACGTCAGCATGAAGCCGCTGCAAATTGTCGACCGAA
GCTGCCGATTTTTCGGATCAAGCTACGCGGGAAGAAAAGCGGGAACTTATGAAGTGACAAAAATTTCTCACAAACCGCCA
ATCATGGTGGACCCTTCGAACCAAATCTTTTTATTCCCTACACTTTCTTCGACTAGACCCCAATGCGGCTGGATTTCCCA
TGTGCATGTAAAAGAATTCAAACCGACTGAATTCGACGATACGGAAGTGACGTTTTCAAACGGAAAAACGATGGAACTGC
CGGTCTCCTGCAATTCGTTCGAGAATCAGGTATACCGGACAGCCTGGCTCAGAACCAAATTTCAGGACAGAATCGAACAC
CGTGTCCCGAAACGGCAGGAATTTATGCTGTATCCGAAGGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGA
GCTCGGGGAGCGGTATTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(10-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G7UAM4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

96.354

100

0.964

Multiple sequence alignment