Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACK3B6_RS04620 Genome accession   NZ_CP176792
Coordinates   920728..921519 (+) Length   263 a.a.
NCBI ID   WP_416043058.1    Uniprot ID   -
Organism   Bacillus halotolerans strain BCP32     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 915728..926519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK3B6_RS04590 (ACK3B6_04590) - 916572..917603 (+) 1032 WP_101863577.1 FecCD family ABC transporter permease -
  ACK3B6_RS04595 (ACK3B6_04595) - 917718..918605 (+) 888 WP_416043055.1 PhzF family phenazine biosynthesis isomerase -
  ACK3B6_RS04600 (ACK3B6_04600) - 918684..919268 (+) 585 WP_416043056.1 nitroreductase -
  ACK3B6_RS04605 (ACK3B6_04605) - 919307..919498 (-) 192 WP_044163723.1 YfhD family protein -
  ACK3B6_RS04610 (ACK3B6_04610) - 919564..919674 (-) 111 WP_010333447.1 YfhE family protein -
  ACK3B6_RS04615 (ACK3B6_04615) - 919728..920639 (-) 912 WP_416043057.1 TIGR01777 family oxidoreductase -
  ACK3B6_RS04620 (ACK3B6_04620) recX 920728..921519 (+) 792 WP_416043058.1 recombination regulator RecX Regulator
  ACK3B6_RS04625 (ACK3B6_04625) - 921526..921846 (+) 321 WP_416043059.1 YfhH family protein -
  ACK3B6_RS04630 (ACK3B6_04630) - 921983..923176 (+) 1194 WP_202853877.1 MFS transporter -
  ACK3B6_RS04635 (ACK3B6_04635) - 923303..924655 (+) 1353 WP_416042739.1 IS1182 family transposase -
  ACK3B6_RS04640 (ACK3B6_04640) - 924780..924932 (-) 153 WP_010333452.1 small, acid-soluble spore protein K -
  ACK3B6_RS04645 (ACK3B6_04645) - 925057..925326 (+) 270 WP_024120650.1 YfhJ family protein -
  ACK3B6_RS04650 (ACK3B6_04650) - 925361..925744 (-) 384 WP_095714802.1 hypothetical protein -
  ACK3B6_RS04655 (ACK3B6_04655) - 925746..925958 (-) 213 WP_010333455.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30773.99 Da        Isoelectric Point: 6.6687

>NTDB_id=1082972 ACK3B6_RS04620 WP_416043058.1 920728..921519(+) (recX) [Bacillus halotolerans strain BCP32]
MPFITKISAQKKNTERFNIFLDEKYAFSVDADVLVKFELTKGKELDDLEIIEIQYGDEVKKGFNRAIDFLSYRMRSTKEV
EDHLKKKETSAPVIAEVIHKLNDYNYLNDQEFAAAYVSTHKKTNGKGPDVLFRELKAKGIDDDTIKDTLSSFSFEEQTEK
AVKHIEKLLKKDKKLSSKEIKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQKEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1082972 ACK3B6_RS04620 WP_416043058.1 920728..921519(+) (recX) [Bacillus halotolerans strain BCP32]
ATGCCATTTATTACAAAGATTTCAGCGCAAAAGAAGAATACGGAACGCTTTAATATTTTTCTGGATGAAAAATATGCTTT
CAGTGTTGACGCAGATGTGCTCGTGAAATTTGAGCTTACAAAGGGAAAAGAGCTTGATGACCTCGAGATCATTGAGATTC
AATACGGAGATGAAGTAAAAAAAGGCTTCAACCGTGCGATTGATTTTTTATCCTATCGAATGCGGTCAACGAAAGAGGTA
GAAGACCACTTAAAGAAAAAAGAAACCTCGGCGCCCGTCATTGCGGAAGTGATTCATAAGCTGAACGATTACAACTATTT
AAATGACCAAGAGTTTGCGGCGGCCTACGTGAGCACTCACAAAAAAACAAACGGAAAAGGGCCTGACGTTTTGTTCAGAG
AGCTGAAAGCGAAGGGGATCGATGACGACACCATCAAAGATACGCTGAGTTCTTTCTCCTTTGAAGAACAGACGGAAAAA
GCAGTTAAGCATATCGAAAAGCTTCTGAAGAAAGACAAGAAACTCTCTTCAAAAGAAATCAAACAGCGAGCACAGATGCA
GCTGCAGCGCAAAGGCTTCTCATTTGATGTCATCTCTGCGGCGCTGGAGCAGATTGAATACGAAAATGACGAAGATACTG
AAAAAGAAGCGCTGCGTCTTCATGCGGAAAAAGCGTTTAGAAAATACCGTTATGACGGCTCCTATGAAAGTGCCATGAAG
GTCAAACAATTTTTATTCAGAAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGAAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

91.635

100

0.916

Multiple sequence alignment