Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACLH0K_RS08370 Genome accession   NZ_CP176772
Coordinates   1788803..1789438 (+) Length   211 a.a.
NCBI ID   WP_411376439.1    Uniprot ID   -
Organism   Arthrobacter sp. MPF02     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1783803..1794438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLH0K_RS08350 (ACLH0K_08350) - 1783825..1784325 (-) 501 WP_411376310.1 N-acetyltransferase family protein -
  ACLH0K_RS08355 (ACLH0K_08355) - 1784376..1786919 (-) 2544 WP_411376311.1 DEAD/DEAH box helicase -
  ACLH0K_RS08360 (ACLH0K_08360) - 1787014..1787793 (+) 780 WP_411376312.1 trans-aconitate 2-methyltransferase -
  ACLH0K_RS08365 (ACLH0K_08365) - 1788015..1788839 (+) 825 WP_411376313.1 ABC transporter permease -
  ACLH0K_RS08370 (ACLH0K_08370) rcrP 1788803..1789438 (+) 636 WP_411376439.1 ABC transporter ATP-binding protein Regulator
  ACLH0K_RS08375 (ACLH0K_08375) - 1789527..1791248 (+) 1722 WP_411376314.1 ABC transporter ATP-binding protein -
  ACLH0K_RS08380 (ACLH0K_08380) - 1791245..1791625 (+) 381 WP_411376315.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 22829.83 Da        Isoelectric Point: 4.2873

>NTDB_id=1082876 ACLH0K_RS08370 WP_411376439.1 1788803..1789438(+) (rcrP) [Arthrobacter sp. MPF02]
MGSTGSGKSTLLNLVPRFLDSTQGEIFLDGTDIQDLRLDALRGSMSIVPQQAHLFSGTISENLRMAAPEASDDELWDVLE
KAQTMRFMRDLPLGLHTPVGQGGTTLSGGQRQRLCIARALLRKSSLFLFDDSFSALDYDTETRLREVLEAELADAAVLMV
AERVSAVEDAGLILVLDGGRIVAQGTHPELLETSGTYREIAESQLALDGPP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=1082876 ACLH0K_RS08370 WP_411376439.1 1788803..1789438(+) (rcrP) [Arthrobacter sp. MPF02]
CTGGGATCCACGGGCAGTGGAAAATCCACGCTTTTGAACCTGGTCCCGCGTTTCCTCGACTCCACCCAAGGAGAGATTTT
CCTGGATGGCACTGACATTCAGGATCTGAGGCTGGATGCGCTCCGCGGAAGCATGTCCATCGTGCCCCAGCAGGCGCACC
TTTTTTCCGGCACCATTTCCGAAAACCTTCGTATGGCAGCTCCTGAAGCATCCGACGACGAACTGTGGGACGTCCTGGAG
AAGGCGCAGACCATGCGGTTCATGCGCGACCTCCCGCTGGGCCTCCACACGCCCGTGGGCCAGGGCGGAACCACCTTGTC
CGGGGGCCAGCGGCAGCGGCTGTGCATCGCACGCGCCCTGCTCCGCAAGTCATCCCTGTTCCTCTTCGACGACAGCTTCT
CTGCGCTCGACTACGACACCGAGACGCGGCTGCGGGAGGTACTGGAGGCAGAGTTGGCGGACGCGGCGGTCCTTATGGTG
GCCGAGCGTGTGTCCGCCGTCGAAGACGCCGGCCTGATTTTGGTGCTCGACGGCGGCCGCATCGTGGCGCAGGGCACGCA
CCCCGAACTGCTGGAAACGTCCGGCACCTACCGCGAAATCGCCGAGTCCCAGCTGGCATTGGACGGCCCGCCGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(1-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

50.718

99.052

0.502

Multiple sequence alignment