Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACK1LH_RS04955 Genome accession   NZ_CP176757
Coordinates   991498..991683 (+) Length   61 a.a.
NCBI ID   WP_029282655.1    Uniprot ID   -
Organism   Metabacillus indicus strain JKLC.Or24     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 986498..996683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK1LH_RS04925 (ACK1LH_04925) - 987149..987964 (-) 816 WP_029282667.1 undecaprenyl-diphosphate phosphatase -
  ACK1LH_RS04930 (ACK1LH_04930) - 988107..988286 (+) 180 WP_029282665.1 YjzC family protein -
  ACK1LH_RS04935 (ACK1LH_04935) - 988356..988541 (-) 186 WP_029282663.1 YjzD family protein -
  ACK1LH_RS04940 (ACK1LH_04940) - 988743..989471 (+) 729 WP_411334632.1 hypothetical protein -
  ACK1LH_RS04945 (ACK1LH_04945) - 989561..990418 (+) 858 WP_411334633.1 NAD-dependent epimerase/dehydratase family protein -
  ACK1LH_RS04950 (ACK1LH_04950) med 990533..991483 (+) 951 WP_203289742.1 BMP family ABC transporter substrate-binding protein Regulator
  ACK1LH_RS04955 (ACK1LH_04955) comZ 991498..991683 (+) 186 WP_029282655.1 ComZ family protein Regulator
  ACK1LH_RS04960 (ACK1LH_04960) - 991715..991975 (-) 261 WP_029282653.1 hypothetical protein -
  ACK1LH_RS04965 (ACK1LH_04965) - 992139..993071 (+) 933 WP_411334634.1 beta-ketoacyl-ACP synthase III -
  ACK1LH_RS04970 (ACK1LH_04970) fabF 993108..994346 (+) 1239 WP_029282649.1 beta-ketoacyl-ACP synthase II -
  ACK1LH_RS04975 (ACK1LH_04975) - 994895..995680 (+) 786 WP_029282647.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 6944.10 Da        Isoelectric Point: 4.7185

>NTDB_id=1082772 ACK1LH_RS04955 WP_029282655.1 991498..991683(+) (comZ) [Metabacillus indicus strain JKLC.Or24]
MSQDTKTLEFMQIAMKYLPEAKAKLDEAGIEIRAEHLQPMMELLTKVMNDAYELGKNEAGK

Nucleotide


Download         Length: 186 bp        

>NTDB_id=1082772 ACK1LH_RS04955 WP_029282655.1 991498..991683(+) (comZ) [Metabacillus indicus strain JKLC.Or24]
ATGAGCCAGGATACTAAAACACTTGAATTTATGCAGATTGCCATGAAATATCTTCCAGAGGCAAAAGCGAAGCTTGATGA
AGCTGGAATTGAAATCAGAGCTGAACACCTTCAGCCAATGATGGAGCTTTTAACGAAAGTCATGAACGATGCATACGAAC
TTGGAAAAAATGAAGCAGGAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(6-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.404

93.443

0.574

Multiple sequence alignment