Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AACH71_RS12650 | Genome accession | NZ_AP029050 |
| Coordinates | 2500201..2500491 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus stercoris strain BST19 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2495201..2505491
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AACH71_RS12635 (BSB_24220) | - | 2495397..2496710 (-) | 1314 | WP_040081079.1 | ubiquitin-like domain-containing protein | - |
| AACH71_RS12640 (BSB_24230) | - | 2496866..2497633 (-) | 768 | WP_136655088.1 | TatD family hydrolase | - |
| AACH71_RS12645 (BSB_24240) | metG | 2497712..2499706 (-) | 1995 | WP_136655089.1 | methionine--tRNA ligase | - |
| AACH71_RS12650 (BSB_24250) | abrB | 2500201..2500491 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| AACH71_RS12655 (BSB_24260) | rsmI | 2500540..2501418 (-) | 879 | WP_136655090.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AACH71_RS12660 (BSB_24270) | - | 2501393..2501692 (-) | 300 | WP_136655091.1 | GIY-YIG nuclease family protein | - |
| AACH71_RS12665 (BSB_24280) | - | 2501679..2502422 (-) | 744 | WP_040081085.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| AACH71_RS12670 (BSB_24290) | yabA | 2502481..2502840 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| AACH71_RS12675 (BSB_24300) | ricT | 2502855..2503682 (-) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| AACH71_RS12680 (BSB_24310) | holB | 2503685..2504674 (-) | 990 | WP_014662475.1 | DNA polymerase III subunit delta' | - |
| AACH71_RS12685 (BSB_24320) | - | 2504686..2505126 (-) | 441 | WP_071582142.1 | YaaR family protein | - |
| AACH71_RS12690 (BSB_24330) | darA | 2505139..2505468 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=108277 AACH71_RS12650 WP_003226760.1 2500201..2500491(+) (abrB) [Bacillus stercoris strain BST19]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=108277 AACH71_RS12650 WP_003226760.1 2500201..2500491(+) (abrB) [Bacillus stercoris strain BST19]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTAC
TCTCGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTAC
TCTCGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |