Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACK1LH_RS02980 Genome accession   NZ_CP176757
Coordinates   572909..573721 (+) Length   270 a.a.
NCBI ID   WP_203289555.1    Uniprot ID   -
Organism   Metabacillus indicus strain JKLC.Or24     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 567909..578721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK1LH_RS02955 (ACK1LH_02955) - 568812..568994 (-) 183 WP_029285923.1 YfhD family protein -
  ACK1LH_RS02960 (ACK1LH_02960) - 569438..569566 (-) 129 WP_081414248.1 YfhE family protein -
  ACK1LH_RS02965 (ACK1LH_02965) - 569674..570231 (-) 558 WP_411334444.1 GNAT family N-acetyltransferase -
  ACK1LH_RS02970 (ACK1LH_02970) - 570689..571819 (-) 1131 WP_411334445.1 amidohydrolase -
  ACK1LH_RS02975 (ACK1LH_02975) - 571843..572745 (-) 903 WP_411334446.1 TIGR01777 family oxidoreductase -
  ACK1LH_RS02980 (ACK1LH_02980) recX 572909..573721 (+) 813 WP_203289555.1 recombination regulator RecX Regulator
  ACK1LH_RS02985 (ACK1LH_02985) - 573727..574383 (-) 657 WP_411334447.1 SDR family NAD(P)-dependent oxidoreductase -
  ACK1LH_RS02990 (ACK1LH_02990) - 574455..574796 (+) 342 WP_203289557.1 YfhH family protein -
  ACK1LH_RS02995 (ACK1LH_02995) - 574834..574992 (-) 159 WP_081414247.1 YpzG family protein -
  ACK1LH_RS03000 (ACK1LH_03000) - 575025..575186 (-) 162 WP_029285938.1 small, acid-soluble spore protein K -
  ACK1LH_RS03005 (ACK1LH_03005) - 575286..575555 (+) 270 WP_029285940.1 YfhJ family protein -
  ACK1LH_RS03010 (ACK1LH_03010) - 575590..576570 (-) 981 WP_411334448.1 metal-dependent hydrolase -
  ACK1LH_RS03015 (ACK1LH_03015) mutY 576807..577901 (+) 1095 WP_411334449.1 A/G-specific adenine glycosylase -
  ACK1LH_RS03020 (ACK1LH_03020) - 577930..578154 (-) 225 WP_029285946.1 hypothetical protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 31482.88 Da        Isoelectric Point: 6.8982

>NTDB_id=1082766 ACK1LH_RS02980 WP_203289555.1 572909..573721(+) (recX) [Metabacillus indicus strain JKLC.Or24]
MPTISKITTQKSSEERFNVFLNDGKGEKFAFSVDQNVLLKFGLKKGLELDEMEILEIQYGDSVKKAFNKAIEFLGFRMRS
EKETADMLLKKEYPESVVTEVIHQLRHYKYVNDSEFADAFVRTHWKTGGKGPGVIKRELSLKGIDKATAEKALEQYTKED
QIEQAMVHAEKTVRKEAKSSTVQTKQKIEQTLLRKGFNFDVISIVTEEMTYENNDDEEYQSLVKQAEKLQRKYAKEKPSA
YRLKMKQALYRKGFQIDMIERFLNEEEEQD

Nucleotide


Download         Length: 813 bp        

>NTDB_id=1082766 ACK1LH_RS02980 WP_203289555.1 572909..573721(+) (recX) [Metabacillus indicus strain JKLC.Or24]
ATGCCAACAATATCGAAAATAACGACTCAAAAGAGCAGTGAAGAACGGTTTAATGTGTTTTTAAATGATGGCAAAGGTGA
AAAATTCGCCTTCAGCGTCGACCAGAACGTTCTATTGAAGTTTGGCCTTAAAAAAGGCCTTGAACTGGATGAGATGGAAA
TCCTCGAGATCCAGTACGGGGATTCGGTCAAAAAGGCGTTTAACAAAGCGATCGAATTTCTCGGATTCAGAATGAGATCA
GAGAAGGAAACGGCCGATATGCTTTTGAAAAAAGAGTACCCTGAATCGGTTGTGACTGAGGTTATCCATCAGCTTCGGCA
TTATAAATACGTTAATGACAGTGAGTTCGCGGATGCATTTGTGCGGACGCACTGGAAAACCGGGGGTAAGGGACCGGGCG
TGATTAAAAGGGAGCTTTCCTTAAAAGGAATTGATAAAGCAACGGCGGAAAAGGCTTTGGAGCAGTATACAAAAGAGGAT
CAGATTGAACAAGCAATGGTCCATGCGGAGAAAACAGTGAGAAAAGAAGCGAAAAGCTCTACTGTTCAGACGAAGCAAAA
AATTGAGCAGACCCTGCTTCGAAAAGGATTCAATTTCGACGTGATTTCAATCGTCACGGAAGAAATGACATATGAGAACA
ATGATGATGAAGAATACCAGTCTCTGGTGAAGCAGGCGGAAAAGCTGCAGCGGAAGTACGCCAAAGAAAAGCCGTCTGCA
TACCGTCTCAAAATGAAGCAGGCCCTATACAGAAAAGGGTTCCAGATCGACATGATTGAACGGTTCCTGAATGAAGAAGA
GGAGCAGGACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(88-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

53.558

98.889

0.53

Multiple sequence alignment