Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   AACH71_RS10865 Genome accession   NZ_AP029050
Coordinates   2153675..2153815 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus stercoris strain BST19     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2148675..2158815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH71_RS10860 - 2152557..2153729 (-) 1173 Protein_2132 condensation domain-containing protein -
  AACH71_RS10865 comS 2153675..2153815 (-) 141 WP_010886404.1 competence protein ComS Regulator
  AACH71_RS10870 srfAB 2153907..2156951 (-) 3045 Protein_2134 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=108271 AACH71_RS10865 WP_010886404.1 2153675..2153815(-) (comS) [Bacillus stercoris strain BST19]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=108271 AACH71_RS10865 WP_010886404.1 2153675..2153815(-) (comS) [Bacillus stercoris strain BST19]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment