Detailed information NTG1082685

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACK6EA_RS04175
• Genome accession: NZ_CP176754
• Coordinates: 895773..896876 (-)
• Length: 367 a.a.
• NCBI ID: WP_411332579.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain JW1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 890773..901876

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK6EA_RS04145 (ACK6EA_04145)	-	891740..891880 (+)	141	WP_015345427.1	hypothetical protein	-
ACK6EA_RS04150 (ACK6EA_04150)	comF	891968..892621 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
ACK6EA_RS04160 (ACK6EA_04160)	-	892843..893394 (-)	552	WP_004918080.1	hypothetical protein	-
ACK6EA_RS04165 (ACK6EA_04165)	-	893449..894099 (-)	651	WP_004918082.1	HD domain-containing protein	-
ACK6EA_RS04170 (ACK6EA_04170)	gdhA	894231..895589 (-)	1359	WP_049334426.1	NADP-specific glutamate dehydrogenase	-
ACK6EA_RS04175 (ACK6EA_04175)	dprA	895773..896876 (-)	1104	WP_411332579.1	DNA-processing protein DprA	Machinery gene
ACK6EA_RS04180 (ACK6EA_04180)	-	896879..897256 (-)	378	WP_049334428.1	group III truncated hemoglobin	-
ACK6EA_RS04185 (ACK6EA_04185)	ruvC	897267..897821 (-)	555	WP_064971300.1	crossover junction endodeoxyribonuclease RuvC	-
ACK6EA_RS04190 (ACK6EA_04190)	-	897845..899035 (-)	1191	WP_153929505.1	carboxypeptidase-like regulatory domain-containing protein	-
ACK6EA_RS04195 (ACK6EA_04195)	-	899065..899538 (-)	474	WP_214192856.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40442.52 Da
• Isoelectric Point: 7.1493

>NTDB_id=1082685 ACK6EA_RS04175 WP_411332579.1 895773..896876(-) (dprA) [Riemerella anatipestifer strain JW1]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYDDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIVYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPIQKPIYDI
IKEVNDISLDDLSEKLNQPISKVLPVLLELELLGLIRANSGRRYSIV

Nucleotide

• Length: 1104 bp

>NTDB_id=1082685 ACK6EA_RS04175 WP_411332579.1 895773..896876(-) (dprA) [Riemerella anatipestifer strain JW1]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATACCGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACACATTGTTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGTTCT
ATTAGTACGGCGAGTTTTGCTAATCAGTATAATAGAGAGGTGTACGCTTTGGCAGGGCGTCTTACGGATAAGTATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCGGTTGAGGTTTCTTTAACTCCTATTCAGAAGCCTATTTATGATATT
ATTAAAGAGGTTAATGATATTTCTTTGGACGACTTGTCAGAAAAGTTAAATCAACCTATTTCTAAAGTGCTTCCAGTTTT
GTTAGAATTAGAATTATTGGGATTGATAAGGGCAAATTCTGGGAGGAGATATTCTATTGTTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	98.093	100	0.981