Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AACH71_RS08210 Genome accession   NZ_AP029050
Coordinates   1583569..1584360 (-) Length   263 a.a.
NCBI ID   WP_069149210.1    Uniprot ID   -
Organism   Bacillus stercoris strain BST19     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1578569..1589360
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH71_RS08175 (BSB_15860) - 1579430..1580290 (-) 861 WP_136655063.1 alpha/beta hydrolase -
  AACH71_RS08180 (BSB_15870) - 1580277..1580609 (-) 333 WP_040083673.1 SdpI family protein -
  AACH71_RS08185 (BSB_15880) - 1580693..1581211 (-) 519 WP_136655062.1 SH3 domain-containing protein -
  AACH71_RS08190 (BSB_15890) - 1581330..1581599 (-) 270 WP_014663267.1 YfhJ family protein -
  AACH71_RS08195 (BSB_15900) - 1581724..1581876 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  AACH71_RS08200 (BSB_15910) - 1581908..1583101 (-) 1194 WP_014663266.1 MFS transporter -
  AACH71_RS08205 (BSB_15920) - 1583246..1583560 (-) 315 WP_014476208.1 YfhH family protein -
  AACH71_RS08210 (BSB_15930) recX 1583569..1584360 (-) 792 WP_069149210.1 recombination regulator RecX Regulator
  AACH71_RS08215 (BSB_15940) - 1584449..1585360 (+) 912 WP_014663263.1 TIGR01777 family oxidoreductase -
  AACH71_RS08220 - 1585415..1585525 (+) 111 WP_003223230.1 YfhE family protein -
  AACH71_RS08225 (BSB_15950) - 1585592..1585783 (+) 192 WP_014663262.1 YfhD family protein -
  AACH71_RS08230 (BSB_15960) - 1585821..1586405 (-) 585 WP_014663261.1 nitroreductase -
  AACH71_RS08235 (BSB_15970) - 1586493..1587374 (-) 882 WP_136655061.1 PhzF family phenazine biosynthesis isomerase -
  AACH71_RS08240 (BSB_15980) - 1587489..1588520 (-) 1032 WP_136655060.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30863.09 Da        Isoelectric Point: 6.6692

>NTDB_id=108266 AACH71_RS08210 WP_069149210.1 1583569..1584360(-) (recX) [Bacillus stercoris strain BST19]
MPFITKISAQKKNTERFNIFLDDKYAFSVDADVLVKYELKKGKELDDLDIIEIQYGDEVKKGFNRALEFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVINAALEQIEYENDEDTEKEALRIQAEKALRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLHEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=108266 AACH71_RS08210 WP_069149210.1 1583569..1584360(-) (recX) [Bacillus stercoris strain BST19]
ATGCCGTTTATTACAAAAATATCAGCGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATATGAGCTCAAGAAGGGAAAAGAACTTGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGCGCGCTTGAATTTTTATCCTATCGAATGCGGTCAACGAAAGAGGTC
GAGGACCACTTGAAGAAAAAAGAAACCTCGCCACCCGTCATTGCGGAGGTCATCCATAAGCTCAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACCCACAAAAAAACAAACGGAAAAGGACCTGATGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCTTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAAGGCTTCTCATTTGATGTCATCAATGCGGCGCTAGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCATTCAAGCAGAAAAAGCGCTTAGAAAATACCGCTATGACGGCTCCTATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAACAATTTCTGCACGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

95.057

100

0.951

Multiple sequence alignment