Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   AACH71_RS06580 Genome accession   NZ_AP029050
Coordinates   1283745..1284866 (-) Length   373 a.a.
NCBI ID   WP_252153584.1    Uniprot ID   -
Organism   Bacillus stercoris strain BST19     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1278745..1289866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH71_RS06555 (BSB_12950) cwlQ 1278885..1279619 (+) 735 WP_252153580.1 bifunctional muramidase/murein lytic transglycosylase -
  AACH71_RS06560 (BSB_12960) - 1279871..1280269 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  AACH71_RS06565 (BSB_12970) spxH 1280266..1281165 (+) 900 WP_041521296.1 protease adaptor protein SpxH -
  AACH71_RS06570 (BSB_12980) - 1281480..1281647 (+) 168 WP_003244944.1 hypothetical protein -
  AACH71_RS06575 (BSB_12990) pepF 1281686..1283515 (-) 1830 WP_168780813.1 oligoendopeptidase F -
  AACH71_RS06580 coiA 1283745..1284866 (-) 1122 WP_252153584.1 competence protein CoiA Machinery gene
  AACH71_RS06585 (BSB_13000) mecA 1285054..1285710 (-) 657 WP_003232942.1 adaptor protein MecA Regulator
  AACH71_RS06590 - 1285677..1285817 (-) 141 WP_134975725.1 hypothetical protein -
  AACH71_RS06595 (BSB_13010) - 1285987..1286643 (+) 657 WP_040083448.1 TerC family protein -
  AACH71_RS06600 (BSB_13020) spx 1286898..1287293 (-) 396 WP_003245483.1 transcriptional regulator Spx -
  AACH71_RS06605 (BSB_13030) - 1287474..1288052 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  AACH71_RS06610 (BSB_13040) - 1288216..1289433 (-) 1218 WP_136654673.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43759.83 Da        Isoelectric Point: 9.9900

>NTDB_id=108253 AACH71_RS06580 WP_252153584.1 1283745..1284866(-) (coiA) [Bacillus stercoris strain BST19]
MFHLLGAQQSQKLKRKRFFCPVCGEELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQKASPILEP
YIKEINQRPDVLARIKERMLAVEYQCATISPDVFQKRTEGFKQAGIIPQWIMGHSRLQRTASSFYQLSAFHWQFINANPY
RELICYCPERRSFLRLSHIIPFYTTHSYSSVQTIPIHRAGIDDLFFTKSKSPIQYSGWAKAIHRFRHKPHRFSSKETNRL
KQLFYEKRQTPFSFLPTEVFVPVVKGAVFKSPVFVWQGFLYLFITDLGEKHAPIRFSAVLQQCKLHIHKKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPADGIRSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=108253 AACH71_RS06580 WP_252153584.1 1283745..1284866(-) (coiA) [Bacillus stercoris strain BST19]
ATGTTTCACCTTTTAGGCGCTCAGCAAAGCCAAAAATTAAAGCGGAAACGATTCTTCTGTCCGGTATGCGGAGAAGAGCT
TGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTCGCCCATAAACAGAACAAGTCCTGCTCCATAGACATAGAACCGG
AAAGCGCCTACCATTTAGAAGGAAAAAGACAGCTGTACGTATGGCTGAAAACGCAAAAGGCTTCTCCCATATTGGAACCG
TATATAAAGGAAATCAACCAGAGACCGGACGTCTTGGCAAGGATCAAGGAGCGTATGCTTGCTGTTGAATATCAATGTGC
CACGATCAGTCCGGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGCAGGGATCATCCCGCAGTGGATTATGGGAC
ACAGCCGCTTACAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAATCCATAC
AGAGAACTGATATGTTATTGTCCGGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAACCCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTATAGACGATCTTTTTTTCACAAAATCGAAATCCCCAATTC
AATATTCAGGCTGGGCGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAGCTCAAAGGAAACAAACCGCCTT
AAGCAGCTGTTTTATGAGAAGCGGCAGACGCCCTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTGTAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTACCTGTTTATCACGGATCTTGGAGAGAAACATGCGCCAA
TTCGTTTTTCAGCCGTTTTACAGCAATGCAAACTGCACATTCATAAAAAGAACATTGCACTCAGATTCGAATGCAGCGAA
GAGTGTCTTTCTGAAGCTGTTAAACAGTACATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAACCAGCCTGCAGATGGCATTCGCTCAATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

90.885

100

0.909


Multiple sequence alignment