Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AACH71_RS05135 Genome accession   NZ_AP029050
Coordinates   1028869..1029453 (-) Length   194 a.a.
NCBI ID   WP_014663802.1    Uniprot ID   -
Organism   Bacillus stercoris strain BST19     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1023869..1034453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH71_RS05110 (BSB_10060) mobB 1024270..1024791 (-) 522 WP_069149525.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AACH71_RS05115 (BSB_10070) glp 1024752..1026044 (-) 1293 WP_136654526.1 gephyrin-like molybdotransferase Glp -
  AACH71_RS05120 (BSB_10080) - 1026062..1027081 (-) 1020 WP_128422201.1 molybdopterin-synthase adenylyltransferase MoeB -
  AACH71_RS05125 (BSB_10090) - 1027132..1027731 (-) 600 WP_040083273.1 molybdenum cofactor guanylyltransferase -
  AACH71_RS05130 (BSB_10100) cse15 1027867..1028829 (+) 963 WP_136654527.1 spore protein Cse15 -
  AACH71_RS05135 (BSB_10110) rok 1028869..1029453 (-) 585 WP_014663802.1 transcriptional regulator Rok Regulator
  AACH71_RS05140 (BSB_10120) ykuV 1029902..1030360 (-) 459 WP_014663801.1 thiol-disulfide oxidoreductase YkuV -
  AACH71_RS05145 (BSB_10130) ahpA 1030429..1030971 (-) 543 WP_014663800.1 biofilm-specific peroxidase AhpA -
  AACH71_RS05150 (BSB_10140) mscT 1031209..1032012 (+) 804 WP_014663799.1 small-conductance mechanosensitive channel protein MscT -
  AACH71_RS05155 (BSB_10150) - 1032048..1032293 (-) 246 WP_003232382.1 YkuS family protein -
  AACH71_RS05160 (BSB_10160) - 1032355..1033479 (-) 1125 WP_136654528.1 N-acetyldiaminopimelate deacetylase -
  AACH71_RS05165 (BSB_10170) dapD 1033549..1034259 (-) 711 WP_014663797.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22141.15 Da        Isoelectric Point: 9.7036

>NTDB_id=108248 AACH71_RS05135 WP_014663802.1 1028869..1029453(-) (rok) [Bacillus stercoris strain BST19]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIETAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=108248 AACH71_RS05135 WP_014663802.1 1028869..1029453(-) (rok) [Bacillus stercoris strain BST19]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAGCCTGACTCTTTGCCTGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTGCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCATAACGCGG
CGATTAAAAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTACATTTTAGAAGGTGAAATCGAAACTGCAGA
ATCAGCTGAATCTGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

99.471

97.423

0.969

Multiple sequence alignment