Detailed information NTG0108242

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AACH71_RS03440
• Genome accession: NZ_AP029050
• Coordinates: 635087..636217 (+)
• Length: 376 a.a.
• NCBI ID: WP_136654444.1
• Uniprot ID: -
• Organism: Bacillus stercoris strain BST19
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 630087..641217

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACH71_RS03415 (BSB_06670)	-	630108..631499 (-)	1392	WP_136654440.1	MFS transporter	-
AACH71_RS03420 (BSB_06680)	-	632333..632803 (-)	471	WP_136654441.1	hypothetical protein	-
AACH71_RS03425 (BSB_06690)	-	632933..633097 (-)	165	WP_003231681.1	hypothetical protein	-
AACH71_RS03430 (BSB_06700)	-	633366..634007 (-)	642	WP_136654442.1	DUF3885 domain-containing protein	-
AACH71_RS03435 (BSB_06710)	-	634286..634798 (-)	513	WP_136654443.1	GNAT family protein	-
AACH71_RS03440 (BSB_06720)	rapC	635087..636217 (+)	1131	WP_136654444.1	tetratricopeptide repeat protein	Regulator
AACH71_RS03445 (BSB_06730)	-	636207..636350 (+)	144	WP_169051592.1	hypothetical protein	-
AACH71_RS03450	-	636379..636926 (-)	548	Protein_685	DNA polymerase	-
AACH71_RS03455 (BSB_06740)	-	636976..637200 (+)	225	Protein_686	HNH/ENDO VII family nuclease	-
AACH71_RS03460 (BSB_06750)	-	637215..637673 (+)	459	WP_136654445.1	SMI1/KNR4 family protein	-
AACH71_RS03465	-	638338..639150 (-)	813	Protein_688	N-acetylmuramoyl-L-alanine amidase	-
AACH71_RS03470	-	639226..639541 (-)	316	Protein_689	phage holin family protein	-
AACH71_RS03475 (BSB_06790)	glnA	639525..640859 (-)	1335	WP_014664076.1	type I glutamate--ammonia ligase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44314.08 Da
• Isoelectric Point: 6.0326

>NTDB_id=108242 AACH71_RS03440 WP_136654444.1 635087..636217(+) (rapC) [Bacillus stercoris strain BST19]
MEQLIPSSAVGVKINEWYKYIRMFAVPDAEISKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMHEFDKKEYIKAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAIPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKEYGKAA
EYIEQAVSLYENDKSDLLPHTLFTLTQIYFKMKDIEKAFILYKKGIEKAQAINDDVLVAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDARIQIQRGECLYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=108242 AACH71_RS03440 WP_136654444.1 635087..636217(+) (rapC) [Bacillus stercoris strain BST19]
ATGGAGCAATTAATTCCGTCATCCGCAGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCAGAGATATCAAAAGCAGAGGTTGAAGAAGAAATAAAACATATGAAGGAAGACCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAATTAATGCTGGATTACCTTGAACCAAAAACAATGAACGAAGAACGGCCTAAAATTTCA
GACTTATTAGAAAAGATTGAAAGCAGCCAAACAAAACTTAAAGGTGTCTTGGAATACTACTGCAATTTCTTTAGAGGAAT
GCACGAATTTGATAAGAAGGAATATATAAAAGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ATGAAATTGAACGAGCTGAGTTCTATTTTAAAATGGCAGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAGCAGCCCTTAACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCATTTGTTGTAGC
AGGCAACTTTGATGATTTGGAAAGTCATGAAAAAGCTATTCCACACCTTCAGAGAGCCTTAAAAGACTCAAAAGCCATAA
ACAAACACAAGCTAATTGGTGCATCATTATATAATTTGGGAAACTGTTATTATAAAATGAAAGAGTATGGCAAAGCTGCT
GAATATATTGAACAAGCAGTCTCATTGTACGAAAACGATAAAAGTGACCTTCTCCCCCACACGTTATTTACACTGACACA
AATTTACTTCAAAATGAAGGATATTGAAAAAGCCTTTATTCTTTATAAAAAAGGAATCGAGAAAGCACAAGCCATAAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTCCGAACT
TTTTCTGTGCTTAAAGATAATGTTATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGACGTAATGGTGGACGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (193-252)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	50.532	100	0.505
rapF	Bacillus subtilis subsp. subtilis str. 168	45.119	100	0.455