Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACK2VN_RS06355 | Genome accession | NZ_CP176690 |
| Coordinates | 1227748..1228791 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013206.1 | Uniprot ID | - |
| Organism | Bacillus paranthracis strain GTVSS-022 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1222748..1233791
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK2VN_RS06320 (ACK2VN_06320) | - | 1223001..1223489 (+) | 489 | WP_000764271.1 | hypothetical protein | - |
| ACK2VN_RS06325 (ACK2VN_06325) | - | 1223526..1223837 (-) | 312 | WP_001093243.1 | hypothetical protein | - |
| ACK2VN_RS06330 (ACK2VN_06330) | - | 1224092..1224307 (+) | 216 | WP_001008331.1 | DUF3912 family protein | - |
| ACK2VN_RS06335 (ACK2VN_06335) | - | 1224395..1224802 (+) | 408 | WP_000877911.1 | hypothetical protein | - |
| ACK2VN_RS06340 (ACK2VN_06340) | - | 1224977..1226371 (-) | 1395 | WP_001094339.1 | L-cystine transporter | - |
| ACK2VN_RS06345 (ACK2VN_06345) | - | 1226479..1226721 (-) | 243 | WP_000440719.1 | DUF2626 domain-containing protein | - |
| ACK2VN_RS06350 (ACK2VN_06350) | - | 1226847..1227542 (-) | 696 | WP_000434105.1 | helix-turn-helix transcriptional regulator | - |
| ACK2VN_RS06355 (ACK2VN_06355) | comGA | 1227748..1228791 (+) | 1044 | WP_001013206.1 | competence protein ComGA | Machinery gene |
| ACK2VN_RS06360 (ACK2VN_06360) | comGB | 1228784..1229815 (+) | 1032 | WP_000473553.1 | competence type IV pilus assembly protein ComGB | - |
| ACK2VN_RS06365 (ACK2VN_06365) | comGC | 1229827..1230126 (+) | 300 | WP_001178694.1 | competence type IV pilus major pilin ComGC | - |
| ACK2VN_RS06370 (ACK2VN_06370) | comGD | 1230123..1230578 (+) | 456 | WP_000810387.1 | comG operon protein ComGD | - |
| ACK2VN_RS06375 (ACK2VN_06375) | comGE | 1230571..1230873 (+) | 303 | WP_000829518.1 | competence type IV pilus minor pilin ComGE | - |
| ACK2VN_RS06380 (ACK2VN_06380) | - | 1230843..1231031 (+) | 189 | Protein_1242 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| ACK2VN_RS06385 (ACK2VN_06385) | - | 1231174..1232343 (-) | 1170 | WP_000190217.1 | site-specific integrase | - |
| ACK2VN_RS06390 (ACK2VN_06390) | - | 1232548..1232895 (-) | 348 | WP_000859168.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39361.84 Da Isoelectric Point: 9.1826
>NTDB_id=1082370 ACK2VN_RS06355 WP_001013206.1 1227748..1228791(+) (comGA) [Bacillus paranthracis strain GTVSS-022]
MNGIESFANTILKEACRVQASDLHIVPRKKDVVIQLRIGKDLMTKQYIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTVCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLESSLRKGYALGFLEEDVYV
MNGIESFANTILKEACRVQASDLHIVPRKKDVVIQLRIGKDLMTKQYIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTVCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLESSLRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=1082370 ACK2VN_RS06355 WP_001013206.1 1227748..1228791(+) (comGA) [Bacillus paranthracis strain GTVSS-022]
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAGGCGTGTAGGGTACAAGCTTCGGATTTACATATTGTGCC
CCGGAAGAAGGATGTAGTGATTCAACTACGCATAGGGAAAGATTTAATGACGAAACAATACATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCCACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGATCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCGGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTGG
GTGAAATTCGTGATGAAGAAACAGCAAAAATCGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACACTGCAT
ACGAATGATGCGAAAGGAGCAATACTTCGGTTTATGGACTTTGGCATAACAAGGCAAGAGATTGAACAATCTTTATTGGC
TATAGCTGCACAGCGACTTGTTGAATTGAAGTGTCCGTTTTGTAAAAGAAAGTGCTCAACTGTATGTAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACGTACAAGCATGAGACATTAGAGTCTTCGTTGCGAAAAGGATACGCTTTAGGATTTTTAGAAGAGGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAGGCGTGTAGGGTACAAGCTTCGGATTTACATATTGTGCC
CCGGAAGAAGGATGTAGTGATTCAACTACGCATAGGGAAAGATTTAATGACGAAACAATACATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCCACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGATCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCGGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTGG
GTGAAATTCGTGATGAAGAAACAGCAAAAATCGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACACTGCAT
ACGAATGATGCGAAAGGAGCAATACTTCGGTTTATGGACTTTGGCATAACAAGGCAAGAGATTGAACAATCTTTATTGGC
TATAGCTGCACAGCGACTTGTTGAATTGAAGTGTCCGTTTTGTAAAAGAAAGTGCTCAACTGTATGTAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACGTACAAGCATGAGACATTAGAGTCTTCGTTGCGAAAAGGATACGCTTTAGGATTTTTAGAAGAGGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.501 |
100 |
0.585 |
| pilB | Vibrio campbellii strain DS40M4 |
35.977 |
100 |
0.366 |