Detailed information NTG1082359

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ACK2VN_RS01600
• Genome accession: NZ_CP176690
• Coordinates: 340378..341727 (+)
• Length: 449 a.a.
• NCBI ID: WP_000900493.1
• Uniprot ID: -
• Organism: Bacillus paranthracis strain GTVSS-022
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 335378..346727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2VN_RS01580 (ACK2VN_01580)	-	336441..337076 (-)	636	WP_000926695.1	YigZ family protein	-
ACK2VN_RS01585 (ACK2VN_01585)	-	337316..338158 (+)	843	WP_000844764.1	DegV family protein	-
ACK2VN_RS01590 (ACK2VN_01590)	-	338332..338646 (+)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
ACK2VN_RS01595 (ACK2VN_01595)	-	338794..340251 (+)	1458	WP_000499503.1	NlpC/P60 family protein	-
ACK2VN_RS01600 (ACK2VN_01600)	comFA	340378..341727 (+)	1350	WP_000900493.1	ATP-dependent helicase ComFA	Machinery gene
ACK2VN_RS01605 (ACK2VN_01605)	-	341727..342431 (+)	705	WP_002028884.1	ComF family protein	-
ACK2VN_RS01610 (ACK2VN_01610)	cspC	342558..342755 (+)	198	WP_001162041.1	cold shock protein CspC	-
ACK2VN_RS01615 (ACK2VN_01615)	hpf	343076..343618 (+)	543	WP_000671191.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACK2VN_RS01620 (ACK2VN_01620)	secA	343894..346401 (+)	2508	WP_000579382.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51011.49 Da
• Isoelectric Point: 9.7406

>NTDB_id=1082359 ACK2VN_RS01600 WP_000900493.1 340378..341727(+) (comFA) [Bacillus paranthracis strain GTVSS-022]
MLGGKQLLLEELSSDLRRELSDLKKRGEVVCVQGITKNTSKYICQRCGNIEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECAVLVRGIHERNGDRELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRKGKQKGVIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVMYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=1082359 ACK2VN_RS01600 WP_000900493.1 340378..341727(+) (comFA) [Bacillus paranthracis strain GTVSS-022]
ATGCTTGGTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAGGGG
AGAGGTTGTATGTGTACAAGGTATAACGAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGCGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTCATGAAAGAAACGGAGACAGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAATGGAAGCGTAATTTCAGAAAGGGGAAACAAAA
AGGTGTTATTGTGTCAGGACGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATCGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGGCGTAGTTTTGAAGAGCCATATGGTGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
AATGGTACGCGCGAAAAAACATATTCAAAGTATGAACAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (110-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49
comFA	Latilactobacillus sakei subsp. sakei 23K	40	90.2	0.361