Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AACH71_RS00515 | Genome accession | NZ_AP029050 |
| Coordinates | 89490..90527 (+) | Length | 345 a.a. |
| NCBI ID | WP_136654212.1 | Uniprot ID | - |
| Organism | Bacillus stercoris strain BST19 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 84490..95527
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AACH71_RS00495 (BSB_00960) | - | 85325..86653 (-) | 1329 | WP_040083766.1 | hemolysin family protein | - |
| AACH71_RS00500 (BSB_00970) | corA | 86795..87748 (+) | 954 | WP_103030653.1 | magnesium transporter CorA | - |
| AACH71_RS00505 (BSB_00980) | - | 87811..88221 (+) | 411 | WP_136654214.1 | CBS domain-containing protein | - |
| AACH71_RS00510 (BSB_01000) | comGA | 88433..89503 (+) | 1071 | WP_095431688.1 | competence protein ComGA | Machinery gene |
| AACH71_RS00515 (BSB_01010) | comGB | 89490..90527 (+) | 1038 | WP_136654212.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AACH71_RS00520 (BSB_01020) | comGC | 90541..90837 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| AACH71_RS00525 (BSB_01030) | comGD | 90827..91258 (+) | 432 | WP_136654211.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AACH71_RS00530 (BSB_01040) | comGE | 91242..91589 (+) | 348 | WP_071581437.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AACH71_RS00535 (BSB_01050) | comGF | 91615..91995 (+) | 381 | WP_014664591.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AACH71_RS00540 (BSB_01060) | comGG | 91996..92370 (+) | 375 | WP_069149864.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| AACH71_RS00545 (BSB_01070) | - | 92442..92621 (+) | 180 | WP_014480252.1 | YqzE family protein | - |
| AACH71_RS00550 (BSB_01080) | - | 92662..92988 (-) | 327 | WP_014664589.1 | YqzG/YhdC family protein | - |
| AACH71_RS00555 (BSB_01090) | tapA | 93260..94015 (+) | 756 | WP_134975341.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AACH71_RS00560 (BSB_01100) | - | 93999..94571 (+) | 573 | WP_080478339.1 | signal peptidase I | - |
| AACH71_RS00565 (BSB_01110) | tasA | 94635..95420 (+) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39892.27 Da Isoelectric Point: 9.8275
>NTDB_id=108231 AACH71_RS00515 WP_136654212.1 89490..90527(+) (comGB) [Bacillus stercoris strain BST19]
MKKIRKTWPLKDQALLLKRLGEMTASGYTLLDGLRLMELQMNKRQSADLTDTVTRLREGAPFYQVLKRLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLILFSAGIGIYYGFVFKKKSPARQMLFCVRIPFVGKLVRLFNSYFFSLQLSSLLKSGLSIYDSLHAFKHQT
FLPFYRCEAEHVIERLKAGESIEAAICGSPFFETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
MKKIRKTWPLKDQALLLKRLGEMTASGYTLLDGLRLMELQMNKRQSADLTDTVTRLREGAPFYQVLKRLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLILFSAGIGIYYGFVFKKKSPARQMLFCVRIPFVGKLVRLFNSYFFSLQLSSLLKSGLSIYDSLHAFKHQT
FLPFYRCEAEHVIERLKAGESIEAAICGSPFFETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=108231 AACH71_RS00515 WP_136654212.1 89490..90527(+) (comGB) [Bacillus stercoris strain BST19]
ATGAAAAAGATTAGAAAAACCTGGCCGTTAAAGGATCAGGCCCTGTTATTAAAGCGGCTCGGAGAAATGACGGCAAGCGG
ATATACACTTCTGGATGGATTGCGCCTGATGGAACTTCAGATGAATAAGAGGCAGTCAGCTGACTTGACTGACACGGTCA
CTCGTTTGAGGGAAGGAGCTCCGTTTTATCAAGTATTAAAGCGTTTGTCATTTCATAAGGAAGCTGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTTGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTCACCGTTGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAATTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTACTGATTCTTTTTTCAGCTGGTATCGGGATTTATTATGGGTTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTTTTTTGTGTCAGGATTCCTTTTGTCGGAAAGCTTGTCAGACTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCCATTTATGACAGCCTACATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCAGAACACGTGATTGAACGGCTAAAAGCCGGTGAATCAATTGAAGCGGCTATTTG
TGGGAGCCCTTTTTTTGAAACTGATTTTTCAAAAGTCATATCCCATGGCCAGCTGAGCGGCCGTCTAGATCGTGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACATAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAC
GGATTTGTTGCTGCAATGATCTTACTTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAACCTGGCCGTTAAAGGATCAGGCCCTGTTATTAAAGCGGCTCGGAGAAATGACGGCAAGCGG
ATATACACTTCTGGATGGATTGCGCCTGATGGAACTTCAGATGAATAAGAGGCAGTCAGCTGACTTGACTGACACGGTCA
CTCGTTTGAGGGAAGGAGCTCCGTTTTATCAAGTATTAAAGCGTTTGTCATTTCATAAGGAAGCTGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTTGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGCTATCCGCTTTTCCTCATCTTCACCGTTGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAATTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTACTGATTCTTTTTTCAGCTGGTATCGGGATTTATTATGGGTTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTTTTTTGTGTCAGGATTCCTTTTGTCGGAAAGCTTGTCAGACTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCCATTTATGACAGCCTACATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCAGAACACGTGATTGAACGGCTAAAAGCCGGTGAATCAATTGAAGCGGCTATTTG
TGGGAGCCCTTTTTTTGAAACTGATTTTTCAAAAGTCATATCCCATGGCCAGCTGAGCGGCCGTCTAGATCGTGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACATAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAC
GGATTTGTTGCTGCAATGATCTTACTTGTGTATTTATCTATGCTTTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
93.498 |
93.623 |
0.875 |