Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   ACK2V7_RS04150 Genome accession   NZ_CP176676
Coordinates   789909..791093 (-) Length   394 a.a.
NCBI ID   WP_002875236.1    Uniprot ID   A0A5T0M325
Organism   Campylobacter jejuni strain GTVSS-018     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 784909..796093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2V7_RS04125 (ACK2V7_04125) fliL 786058..786594 (+) 537 WP_002875239.1 flagellar basal body-associated protein FliL -
  ACK2V7_RS04130 (ACK2V7_04130) acpS 786594..786941 (+) 348 WP_002825806.1 holo-ACP synthase -
  ACK2V7_RS04135 (ACK2V7_04135) - 786942..787361 (-) 420 WP_002780440.1 hypothetical protein -
  ACK2V7_RS04140 (ACK2V7_04140) - 787358..788719 (-) 1362 WP_002875238.1 cytochrome P450 -
  ACK2V7_RS04145 (ACK2V7_04145) - 788716..789837 (-) 1122 WP_002875237.1 hypothetical protein -
  ACK2V7_RS04150 (ACK2V7_04150) kpsS 789909..791093 (-) 1185 WP_002875236.1 capsule polysaccharide modification protein KpsS Regulator
  ACK2V7_RS04155 (ACK2V7_04155) kpsC 791090..793159 (-) 2070 WP_002875235.1 capsular polysaccharide biosynthesis protein -
  ACK2V7_RS04160 (ACK2V7_04160) cysC 793156..793668 (-) 513 WP_002818256.1 cytidine diphosphoramidate kinase -
  ACK2V7_RS04165 (ACK2V7_04165) - 793658..794419 (-) 762 WP_002875234.1 CTP:phosphoglutamine cytidylyltransferase -
  ACK2V7_RS04170 (ACK2V7_04170) - 794421..795023 (-) 603 WP_002872737.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46865.54 Da        Isoelectric Point: 9.9073

>NTDB_id=1082264 ACK2V7_RS04150 WP_002875236.1 789909..791093(-) (kpsS) [Campylobacter jejuni strain GTVSS-018]
MRFSTKIKKEFSGKNILLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=1082264 ACK2V7_RS04150 WP_002875236.1 789909..791093(-) (kpsS) [Campylobacter jejuni strain GTVSS-018]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATATTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGTCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T0M325

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.985

100

0.99


Multiple sequence alignment