Detailed information NTG1082257

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACK2V7_RS02840
• Genome accession: NZ_CP176676
• Coordinates: 521442..522401 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain GTVSS-018
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 516442..527401

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2V7_RS02815 (ACK2V7_02815)	neuC	517009..518124 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
ACK2V7_RS02820 (ACK2V7_02820)	-	518121..518987 (+)	867	Protein_547	beta-1,4-N-acetylgalactosaminyltransferase	-
ACK2V7_RS02825 (ACK2V7_02825)	-	519069..519731 (+)	663	WP_032596875.1	cytidylyltransferase domain-containing protein	-
ACK2V7_RS02830 (ACK2V7_02830)	-	519726..520575 (-)	850	Protein_549	glycosyltransferase	-
ACK2V7_RS02835 (ACK2V7_02835)	waaV	520559..521383 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
ACK2V7_RS02840 (ACK2V7_02840)	waaF	521442..522401 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
ACK2V7_RS02845 (ACK2V7_02845)	gmhA	522382..522942 (-)	561	WP_002875424.1	D-sedoheptulose 7-phosphate isomerase	-
ACK2V7_RS02850 (ACK2V7_02850)	rfaE1	522939..524324 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACK2V7_RS02855 (ACK2V7_02855)	rfaD	524317..525270 (-)	954	WP_052794327.1	ADP-glyceromanno-heptose 6-epimerase	-
ACK2V7_RS02860 (ACK2V7_02860)	gmhB	525271..525831 (-)	561	Protein_555	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
ACK2V7_RS02865 (ACK2V7_02865)	-	525912..526214 (+)	303	WP_002852762.1	c-type cytochrome	-
ACK2V7_RS02870 (ACK2V7_02870)	ccoS	526237..526443 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=1082257 ACK2V7_RS02840 WP_002875425.1 521442..522401(+) (waaF) [Campylobacter jejuni strain GTVSS-018]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=1082257 ACK2V7_RS02840 WP_002875425.1 521442..522401(+) (waaF) [Campylobacter jejuni strain GTVSS-018]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1