Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | ACK2V6_RS12560 | Genome accession | NZ_CP176657 |
| Coordinates | 2733888..2734406 (-) | Length | 172 a.a. |
| NCBI ID | WP_005462534.1 | Uniprot ID | Q87LS4 |
| Organism | Vibrio parahaemolyticus strain GTVSS-032 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2728888..2739406
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK2V6_RS12535 (ACK2V6_12535) | rimM | 2728997..2729545 (-) | 549 | WP_005462552.1 | ribosome maturation factor RimM | - |
| ACK2V6_RS12540 (ACK2V6_12540) | rpsP | 2729574..2729822 (-) | 249 | WP_005379962.1 | 30S ribosomal protein S16 | - |
| ACK2V6_RS12545 (ACK2V6_12545) | ffh | 2730032..2731414 (-) | 1383 | WP_005462555.1 | signal recognition particle protein | - |
| ACK2V6_RS12550 (ACK2V6_12550) | - | 2731627..2732421 (+) | 795 | WP_005462565.1 | inner membrane protein YpjD | - |
| ACK2V6_RS12555 (ACK2V6_12555) | - | 2732547..2733827 (+) | 1281 | WP_005462557.1 | HlyC/CorC family transporter | - |
| ACK2V6_RS12560 (ACK2V6_12560) | luxS | 2733888..2734406 (-) | 519 | WP_005462534.1 | S-ribosylhomocysteine lyase | Regulator |
| ACK2V6_RS12565 (ACK2V6_12565) | - | 2734473..2735078 (-) | 606 | WP_005480904.1 | hypothetical protein | - |
| ACK2V6_RS12570 (ACK2V6_12570) | gshA | 2735103..2736671 (-) | 1569 | WP_005462538.1 | glutamate--cysteine ligase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19033.73 Da Isoelectric Point: 4.7134
>NTDB_id=1082106 ACK2V6_RS12560 WP_005462534.1 2733888..2734406(-) (luxS) [Vibrio parahaemolyticus strain GTVSS-032]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
Nucleotide
Download Length: 519 bp
>NTDB_id=1082106 ACK2V6_RS12560 WP_005462534.1 2733888..2734406(-) (luxS) [Vibrio parahaemolyticus strain GTVSS-032]
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTGAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTTGCAGACGCATGGCTTGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACTGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTGAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTTGCAGACGCATGGCTTGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACTGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
88.889 |
99.419 |
0.884 |