Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | ACK2V4_RS17390 | Genome accession | NZ_CP176647 |
| Coordinates | 534035..535132 (+) | Length | 365 a.a. |
| NCBI ID | WP_025516436.1 | Uniprot ID | - |
| Organism | Vibrio parahaemolyticus strain GTVSS-031 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 529035..540132
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK2V4_RS17360 (ACK2V4_17360) | - | 529170..530147 (+) | 978 | WP_062854640.1 | Gfo/Idh/MocA family protein | - |
| ACK2V4_RS17365 (ACK2V4_17365) | - | 530221..531558 (-) | 1338 | WP_062854641.1 | MATE family efflux transporter | - |
| ACK2V4_RS17370 (ACK2V4_17370) | - | 531681..531995 (-) | 315 | WP_005453573.1 | DUF496 family protein | - |
| ACK2V4_RS17375 (ACK2V4_17375) | - | 532323..532538 (+) | 216 | WP_005477197.1 | hypothetical protein | - |
| ACK2V4_RS17380 (ACK2V4_17380) | - | 532716..533366 (+) | 651 | WP_020838058.1 | YceH family protein | - |
| ACK2V4_RS17385 (ACK2V4_17385) | - | 533363..533683 (+) | 321 | WP_005463466.1 | GIY-YIG nuclease family protein | - |
| ACK2V4_RS17390 (ACK2V4_17390) | luxP | 534035..535132 (+) | 1098 | WP_025516436.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| ACK2V4_RS17395 (ACK2V4_17395) | luxQ | 535132..537708 (+) | 2577 | WP_005477121.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| ACK2V4_RS17400 (ACK2V4_17400) | - | 537920..538375 (+) | 456 | WP_005477342.1 | MarR family transcriptional regulator | - |
| ACK2V4_RS17405 (ACK2V4_17405) | - | 538413..539468 (+) | 1056 | WP_025623626.1 | HlyD family secretion protein | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41367.73 Da Isoelectric Point: 5.0568
>NTDB_id=1081940 ACK2V4_RS17390 WP_025516436.1 534035..535132(+) (luxP) [Vibrio parahaemolyticus strain GTVSS-031]
MNKALVLSLISIVGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN
MNKALVLSLISIVGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=1081940 ACK2V4_RS17390 WP_025516436.1 534035..535132(+) (luxP) [Vibrio parahaemolyticus strain GTVSS-031]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGTCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTCCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCGAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTAAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACATGTTTTAGATTCCACCAAAACCAAACTTATCTTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGTAAGCAGTTTCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGTTTGAAAAAATACCCAGATGTCGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTTATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGTATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGATAATTGA
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGTCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTCCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCGAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTAAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACATGTTTTAGATTCCACCAAAACCAAACTTATCTTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGTAAGCAGTTTCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGTTTGAAAAAATACCCAGATGTCGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTTATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGTATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGATAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
64.286 |
99.726 |
0.641 |