Detailed information NTG1081901

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACK2V4_RS01305
• Genome accession: NZ_CP176646
• Coordinates: 276812..277819 (-)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain GTVSS-031
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 271812..282819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2V4_RS01275 (ACK2V4_01275)	zapB	271981..272223 (+)	243	WP_005481417.1	cell division protein ZapB	-
ACK2V4_RS01280 (ACK2V4_01280)	rraA	272328..272840 (-)	513	WP_062854565.1	ribonuclease E activity regulator RraA	-
ACK2V4_RS01285 (ACK2V4_01285)	-	272917..273834 (-)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACK2V4_RS01290 (ACK2V4_01290)	hslU	274019..275350 (-)	1332	WP_025441237.1	HslU--HslV peptidase ATPase subunit	-
ACK2V4_RS01295 (ACK2V4_01295)	hslV	275374..275925 (-)	552	WP_005455873.1	ATP-dependent protease subunit HslV	-
ACK2V4_RS01300 (ACK2V4_01300)	ftsN	276091..276636 (-)	546	WP_005481405.1	cell division protein FtsN	-
ACK2V4_RS01305 (ACK2V4_01305)	cytR	276812..277819 (-)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
ACK2V4_RS01310 (ACK2V4_01310)	priA	278152..280356 (-)	2205	WP_029805229.1	primosomal protein N'	-
ACK2V4_RS01315 (ACK2V4_01315)	rpmE	280651..280872 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
ACK2V4_RS01320 (ACK2V4_01320)	rpsJ	281330..281641 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
ACK2V4_RS01325 (ACK2V4_01325)	rplC	281656..282285 (+)	630	WP_005456132.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=1081901 ACK2V4_RS01305 WP_005481416.1 276812..277819(-) (cytR) [Vibrio parahaemolyticus strain GTVSS-031]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=1081901 ACK2V4_RS01305 WP_005481416.1 276812..277819(-) (cytR) [Vibrio parahaemolyticus strain GTVSS-031]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCATT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAGCTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCTGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTGACAACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTCCTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904