Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACK2I7_RS01405 Genome accession   NZ_CP176632
Coordinates   284159..285214 (+) Length   351 a.a.
NCBI ID   WP_021001375.1    Uniprot ID   -
Organism   Streptococcus anginosus strain SFAD 40     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 279159..290214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2I7_RS01375 - 279679..280314 (-) 636 WP_021001372.1 YigZ family protein -
  ACK2I7_RS01380 comFA/cflA 280371..281672 (+) 1302 WP_021001373.1 DEAD/DEAH box helicase Machinery gene
  ACK2I7_RS01385 - 281669..282334 (+) 666 WP_003025757.1 ComF family protein -
  ACK2I7_RS01390 hpf 282413..282955 (+) 543 WP_003025754.1 ribosome hibernation-promoting factor, HPF/YfiA family -
  ACK2I7_RS01395 rsmD 283143..283691 (+) 549 WP_025271932.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACK2I7_RS01400 coaD 283681..284178 (+) 498 WP_021001374.1 pantetheine-phosphate adenylyltransferase -
  ACK2I7_RS01405 sepM 284159..285214 (+) 1056 WP_021001375.1 SepM family pheromone-processing serine protease Regulator
  ACK2I7_RS01410 - 285352..285918 (+) 567 WP_021001376.1 YutD family protein -
  ACK2I7_RS01415 rlmN 285952..287034 (+) 1083 WP_021001377.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACK2I7_RS01420 - 287027..287557 (+) 531 WP_003025737.1 VanZ family protein -
  ACK2I7_RS01425 trpB 287942..289138 (+) 1197 WP_021001378.1 tryptophan synthase subunit beta -
  ACK2I7_RS01430 cclA/cilC 289308..289967 (-) 660 WP_049516828.1 prepilin peptidase Machinery gene

Sequence


Protein


Download         Length: 351 a.a.        Molecular weight: 38338.29 Da        Isoelectric Point: 10.1906

>NTDB_id=1081697 ACK2I7_RS01405 WP_021001375.1 284159..285214(+) (sepM) [Streptococcus anginosus strain SFAD 40]
MEKPRNKFKKWPIIAVVGLILLFLSFVVPLPYYIEVPGGAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDITLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFNSSKELIDYVGAQKIGSKVKVNYVEDGQKKSATGKIIKLENGKNGIGISLIDRTEVTSNTPIEFSTAGIGGPSAGL
MFSLAIYTQIADPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEVKKSNPKAKTNYETAL
AAAKKIKTKMKIVPVKTLQDAIDYLKSTKKS

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=1081697 ACK2I7_RS01405 WP_021001375.1 284159..285214(+) (sepM) [Streptococcus anginosus strain SFAD 40]
ATGGAAAAACCAAGAAATAAATTTAAAAAATGGCCGATAATTGCAGTAGTAGGGTTGATTTTGCTTTTCTTATCTTTTGT
AGTTCCCTTGCCTTATTATATTGAGGTGCCAGGTGGTGCAGCGGATGTCCGTCAGGTATTGCGCGTGGACAACAAAGAAG
ATAAGGAAAAAGGTTCTTATAATTTTGTAACGGTTGGAATTCAGCATGCGACCTTCGCTCATTTGGTTTATGCTTGGCTG
ACACCTTTTACGGATATTTATTCGGCGAAGGATTTGACTGGTGGAACTTCTGATAAAGAATACATGCGGATCAATCAGTT
TTATATGGAAACGTCGCAAAACCTAGCTAAATACCAAGGGTTGAAAAAAGCTGGCAAAGACATTACTCTGAAATATCTAG
GGGTTTACGTCTTGCAAGTCACAAAGAATTCTACTTTTAAAGGTATTTTAAATATTGCAGATACCGTGACAGGTGTGAAT
GATAAGACTTTCAATAGTTCAAAAGAATTGATAGACTATGTCGGAGCGCAAAAGATTGGCAGCAAGGTCAAGGTGAACTA
TGTAGAAGACGGTCAGAAGAAATCTGCTACAGGTAAAATTATTAAACTTGAAAATGGAAAAAACGGGATTGGTATTAGCT
TGATCGACCGAACAGAAGTCACAAGCAACACACCAATTGAATTTTCAACAGCCGGTATTGGTGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACGCAAATTGCAGATCCAACATTGAGAGACGGCAGAAATATTGCTGGGACGGGCTCAAT
TGACCGCGAAGGAAAAGTTGGCGACATTGGTGGGATTGACAAAAAAGTTGTTTCAGCAGCTAAAAATGGCGCAGAAATTT
TCTTTGCGCCAAATAATCCAGTCACCAAGGAAGTGAAAAAATCCAATCCTAAAGCGAAAACAAACTATGAGACAGCTTTG
GCAGCTGCTAAAAAAATTAAAACTAAAATGAAAATTGTACCTGTCAAGACCTTGCAAGACGCAATTGATTACCTCAAGAG
CACAAAAAAGTCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

64.516

97.151

0.627


Multiple sequence alignment