Detailed information
Bioinformatically predicted
Overview
| Name | scnR | Type | Regulator |
| Locus tag | ACK2JE_RS10070 | Genome accession | NZ_CP176625 |
| Coordinates | 2133372..2134067 (+) | Length | 231 a.a. |
| NCBI ID | WP_013380612.1 | Uniprot ID | A0AB74EZS3 |
| Organism | Eubacterium callanderi strain SFAD75 | ||
| Function | regulate comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2128372..2139067
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK2JE_RS10050 | - | 2128953..2130437 (+) | 1485 | WP_013380617.1 | FGGY family carbohydrate kinase | - |
| ACK2JE_RS10055 | - | 2130813..2131547 (-) | 735 | WP_013380615.1 | ABC transporter permease | - |
| ACK2JE_RS10060 | - | 2131560..2132309 (-) | 750 | WP_013380614.1 | ABC transporter permease | - |
| ACK2JE_RS10065 | - | 2132309..2133217 (-) | 909 | WP_013380613.1 | ATP-binding cassette domain-containing protein | - |
| ACK2JE_RS10070 | scnR | 2133372..2134067 (+) | 696 | WP_013380612.1 | response regulator transcription factor | Regulator |
| ACK2JE_RS10075 | - | 2134080..2135519 (+) | 1440 | WP_013380611.1 | sensor histidine kinase | - |
| ACK2JE_RS10080 | - | 2135575..2135973 (-) | 399 | WP_070081230.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| ACK2JE_RS10090 | - | 2136340..2137389 (+) | 1050 | WP_013380608.1 | response regulator | - |
| ACK2JE_RS10095 | - | 2137607..2139025 (+) | 1419 | WP_013380606.1 | C69 family dipeptidase | - |
Sequence
Protein
Download Length: 231 a.a. Molecular weight: 25718.92 Da Isoelectric Point: 4.9106
>NTDB_id=1081605 ACK2JE_RS10070 WP_013380612.1 2133372..2134067(+) (scnR) [Eubacterium callanderi strain SFAD75]
MDYIKDKGILLVDDEPELLKLVHKILENEGFAKVYTASSMAEGMTVFLEKAPDMAVLDVMLPDGEGFELLKFIRGSSDIP
VLFLSARGNADDRFTGFGLGADDYIIKPFLPQELVFRITAILKRAYKNEAPTFILADATVDLDRAEIIRGEEILPLTAKE
HAILQKLYENAGKIVTIGALCDFVWEGDSYGYEKPLMAHIGRIREKIETNPSHPKSLITVKGLGYKLLVSK
MDYIKDKGILLVDDEPELLKLVHKILENEGFAKVYTASSMAEGMTVFLEKAPDMAVLDVMLPDGEGFELLKFIRGSSDIP
VLFLSARGNADDRFTGFGLGADDYIIKPFLPQELVFRITAILKRAYKNEAPTFILADATVDLDRAEIIRGEEILPLTAKE
HAILQKLYENAGKIVTIGALCDFVWEGDSYGYEKPLMAHIGRIREKIETNPSHPKSLITVKGLGYKLLVSK
Nucleotide
Download Length: 696 bp
>NTDB_id=1081605 ACK2JE_RS10070 WP_013380612.1 2133372..2134067(+) (scnR) [Eubacterium callanderi strain SFAD75]
ATGGATTACATTAAAGATAAAGGCATTCTTCTGGTCGACGATGAACCAGAGCTTTTAAAGCTGGTGCATAAGATACTCGA
AAATGAAGGATTTGCGAAGGTTTATACAGCGTCGAGCATGGCCGAGGGAATGACCGTTTTTCTGGAAAAAGCTCCGGATA
TGGCCGTGCTTGATGTGATGCTGCCAGATGGTGAAGGTTTTGAGCTGCTAAAATTCATCCGTGGATCCTCGGATATCCCG
GTGCTTTTTTTATCAGCCAGAGGCAATGCCGACGACCGGTTCACCGGCTTTGGTCTGGGAGCGGATGATTATATTATCAA
GCCCTTTCTGCCCCAGGAGCTTGTGTTCAGGATCACAGCTATTTTAAAACGTGCCTACAAAAACGAAGCGCCGACCTTTA
TCCTGGCTGACGCCACAGTAGATCTGGACCGCGCTGAGATTATCAGGGGAGAGGAGATTCTTCCCCTTACGGCCAAAGAG
CATGCCATTCTTCAAAAGCTCTATGAAAATGCAGGGAAAATTGTAACCATTGGCGCCCTCTGTGATTTTGTATGGGAGGG
CGACAGCTATGGCTATGAAAAACCGCTCATGGCTCATATCGGGCGTATCCGGGAAAAAATCGAGACTAACCCCAGCCATC
CAAAGTCTCTTATTACAGTCAAAGGGCTTGGCTATAAGCTGCTCGTAAGTAAATAG
ATGGATTACATTAAAGATAAAGGCATTCTTCTGGTCGACGATGAACCAGAGCTTTTAAAGCTGGTGCATAAGATACTCGA
AAATGAAGGATTTGCGAAGGTTTATACAGCGTCGAGCATGGCCGAGGGAATGACCGTTTTTCTGGAAAAAGCTCCGGATA
TGGCCGTGCTTGATGTGATGCTGCCAGATGGTGAAGGTTTTGAGCTGCTAAAATTCATCCGTGGATCCTCGGATATCCCG
GTGCTTTTTTTATCAGCCAGAGGCAATGCCGACGACCGGTTCACCGGCTTTGGTCTGGGAGCGGATGATTATATTATCAA
GCCCTTTCTGCCCCAGGAGCTTGTGTTCAGGATCACAGCTATTTTAAAACGTGCCTACAAAAACGAAGCGCCGACCTTTA
TCCTGGCTGACGCCACAGTAGATCTGGACCGCGCTGAGATTATCAGGGGAGAGGAGATTCTTCCCCTTACGGCCAAAGAG
CATGCCATTCTTCAAAAGCTCTATGAAAATGCAGGGAAAATTGTAACCATTGGCGCCCTCTGTGATTTTGTATGGGAGGG
CGACAGCTATGGCTATGAAAAACCGCTCATGGCTCATATCGGGCGTATCCGGGAAAAAATCGAGACTAACCCCAGCCATC
CAAAGTCTCTTATTACAGTCAAAGGGCTTGGCTATAAGCTGCTCGTAAGTAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| scnR | Streptococcus mutans UA159 |
50.435 |
99.567 |
0.502 |