Detailed information NTG1081490

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: CLC19224_RS01635
• Genome accession: NZ_CP176605
• Coordinates: 295323..296501 (+)
• Length: 392 a.a.
• NCBI ID: WP_257398510.1
• Uniprot ID: -
• Organism: Campylobacter lari subsp. concheus strain RM19224
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 290323..301501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLC19224_RS01620 (CLC19224_00320)	-	290699..292180 (+)	1482	WP_257399000.1	sugar phosphate nucleotidyltransferase	-
CLC19224_RS01625 (CLC19224_00321)	-	292177..293268 (+)	1092	WP_410708328.1	hypothetical protein	-
CLC19224_RS01630 (CLC19224_00322)	-	293299..295326 (+)	2028	WP_257398509.1	capsular polysaccharide biosynthesis protein	-
CLC19224_RS01635 (CLC19224_00323)	kpsS	295323..296501 (+)	1179	WP_257398510.1	capsule biosynthesis protein	Regulator
CLC19224_RS01640 (CLC19224_00324)	-	296498..298006 (-)	1509	WP_257398511.1	SGNH/GDSL hydrolase family protein	-
CLC19224_RS01645 (CLC19224_00325)	-	298170..299300 (+)	1131	WP_257398512.1	DUF829 domain-containing protein	-
CLC19224_RS01650 (CLC19224_00326)	-	299310..300683 (+)	1374	WP_240385086.1	cytochrome P450	-
CLC19224_RS01655 (CLC19224_00327)	-	300680..301033 (+)	354	WP_039627957.1	membrane protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46368.93 Da
• Isoelectric Point: 10.1351

>NTDB_id=1081490 CLC19224_RS01635 WP_257398510.1 295323..296501(+) (kpsS) [Campylobacter lari subsp. concheus strain RM19224]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIAIKIPKANVYKVNFNGGDFLFYPFKSINYTKSLAELESFYKKLFEEKQIQV
ILMYNDCRKIHEIAINVAKQMDIEVWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSTFKNM
AFASFLYWLFAFLLSWYFNNSLHHRSLKLFDFLPWFCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLAFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINTRGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide

• Length: 1179 bp

>NTDB_id=1081490 CLC19224_RS01635 WP_257398510.1 295323..296501(+) (kpsS) [Campylobacter lari subsp. concheus strain RM19224]
ATGAATTTAAGTAAGAAGTTAAAAAAATTTTCCGGTAAAAATGTTTTGTTACTCCAAGGGCCTGTGGGAGGATTTTTTCG
CAAAATTGCTATAAAAATTCCAAAAGCTAATGTTTATAAAGTAAATTTTAATGGAGGAGATTTTTTATTTTATCCTTTTA
AAAGTATTAATTATACCAAAAGCTTAGCTGAACTTGAAAGCTTTTATAAAAAGCTTTTTGAAGAAAAGCAAATTCAAGTT
ATTTTGATGTATAATGATTGTAGAAAAATTCATGAGATAGCCATTAATGTAGCTAAGCAAATGGATATTGAAGTGTGGAT
TTTTGAAGAAGGTTATATAAGACCAAACTTCATTACTTTTGAAAAAGATGGAGTAAACGCAAACTCGACCCTACCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTTTCAAGTACTTTTAAAAATATG
GCTTTTGCTTCATTTTTATACTGGCTTTTTGCTTTTTTACTTTCTTGGTATTTTAATAATTCTTTACACCATAGAAGTTT
AAAATTATTTGACTTTTTACCTTGGTTTTGCTCAGTATATAGAAAAAACAAATACAAAATCACAGAAAAAAGTTTAAACG
AGAAAATTCTTTCTTTAAAACAAAAGTATTTTTTAGCTATTTTGCAAGTGCATAATGATACTCAATTGTCTCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAAGTGATTATCTCTTTTGCTAATCATGCCAAAGCAAAGTCTTATCTAGCTTT
TAAGCATCATCCTATGGATCGTGGTTATAGGGATTACACAAAACTTATAGAAGATTTGAGCTTAAAATACAATGTTGAGG
GTAGAATTTTATATGTACATGATTTACATTTGCCTACACTTTTGATCAATACAAGAGGTACTATAGTCATAAATAGTACA
GTAGGACTTTCTGCTTTATATCACAACAGCCCTTTAAAAGTTATGGGAAAAGCCTTTTACGATATAGAAGGTTTAACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAGTGTAGAGCATATAAGCCTGATGCGGTTTTGCACGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTCAATGGAAATTTCTTCAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.025	100	0.625