Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FE90_RS06650 Genome accession   NZ_CP008695
Coordinates   1301667..1302116 (-) Length   149 a.a.
NCBI ID   WP_038433607.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M23ND     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1296667..1307116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FE90_RS06630 (FE90_1322) - 1296740..1297186 (-) 447 WP_002986111.1 dUTP diphosphatase -
  FE90_RS06635 (FE90_1323) - 1297296..1298063 (-) 768 WP_002986113.1 epoxyqueuosine reductase QueH -
  FE90_RS06640 (FE90_1324) - 1298181..1299965 (-) 1785 WP_038433605.1 ABC transporter ATP-binding protein -
  FE90_RS06645 (FE90_1325) - 1299968..1301674 (-) 1707 WP_038433606.1 ABC transporter ATP-binding protein -
  FE90_RS06650 (FE90_1326) rcrR 1301667..1302116 (-) 450 WP_038433607.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FE90_RS06655 (FE90_1328) - 1302413..1303429 (+) 1017 WP_002986123.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  FE90_RS06660 (FE90_1329) galU 1303462..1304361 (+) 900 WP_002986125.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  FE90_RS06665 (FE90_1330) - 1304460..1305131 (-) 672 WP_011017305.1 rhomboid family intramembrane serine protease -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17317.17 Da        Isoelectric Point: 9.5568

>NTDB_id=108148 FE90_RS06650 WP_038433607.1 1301667..1302116(-) (rcrR) [Streptococcus pyogenes strain M23ND]
MSQVIGDLRELIHQIEQISDEIAKKYDVEHLAGPQGYVLVFLAKHQNQEIFVKDSEKQLRISKSVASHLVKRMVKNGFIN
VMPSQVDKRYKQVVLAQVGRDKLPLLRECRKDIEHYFLKEITKEELLTAKKVIEQLKQNMLTYKGDNDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=108148 FE90_RS06650 WP_038433607.1 1301667..1302116(-) (rcrR) [Streptococcus pyogenes strain M23ND]
ATGTCACAAGTGATAGGTGATTTACGTGAATTGATACATCAAATCGAACAAATTAGTGATGAGATTGCAAAAAAATATGA
TGTAGAGCATCTAGCAGGTCCTCAAGGTTATGTTCTTGTTTTTTTAGCTAAACACCAAAATCAAGAAATATTTGTCAAAG
ATAGTGAAAAACAACTTCGTATCTCAAAGTCAGTTGCTAGTCATTTAGTGAAACGTATGGTCAAAAATGGGTTTATCAAT
GTGATGCCTTCCCAAGTGGATAAGCGTTATAAGCAAGTAGTGTTAGCGCAGGTTGGTAGAGATAAATTGCCTTTGTTGCG
GGAGTGTCGTAAGGATATCGAGCACTATTTTTTAAAAGAAATTACAAAAGAAGAGTTGCTGACAGCGAAAAAAGTAATTG
AACAGCTCAAGCAAAATATGCTAACTTATAAAGGAGACAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

46.429

93.96

0.436