Detailed information NTG1081473

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: CLC19222_RS01635
• Genome accession: NZ_CP176604
• Coordinates: 297494..298672 (+)
• Length: 392 a.a.
• NCBI ID: WP_257403739.1
• Uniprot ID: -
• Organism: Campylobacter lari subsp. concheus strain RM19222
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 292494..303672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLC19222_RS01620 (CLC19222_00320)	-	292899..294218 (+)	1320	WP_257403744.1	protoporphyrinogen/coproporphyrinogen oxidase	-
CLC19222_RS01625 (CLC19222_00321)	-	294298..295473 (+)	1176	WP_257403743.1	DUF6716 putative glycosyltransferase	-
CLC19222_RS01630 (CLC19222_00322)	-	295470..297497 (+)	2028	WP_257403741.1	capsular polysaccharide biosynthesis protein	-
CLC19222_RS01635 (CLC19222_00323)	kpsS	297494..298672 (+)	1179	WP_257403739.1	capsule biosynthesis protein	Regulator
CLC19222_RS01640	-	298669..299070 (-)	402	WP_257403737.1	hypothetical protein	-
CLC19222_RS01645	-	299767..299967 (-)	201	WP_257403736.1	hypothetical protein	-
CLC19222_RS01650 (CLC19222_00325)	-	300299..301429 (+)	1131	WP_257403734.1	DUF829 domain-containing protein	-
CLC19222_RS01655 (CLC19222_00326)	-	301439..302812 (+)	1374	WP_257403732.1	cytochrome P450	-
CLC19222_RS01660 (CLC19222_00327)	-	302809..303162 (+)	354	WP_039625388.1	membrane protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46242.87 Da
• Isoelectric Point: 10.1916

>NTDB_id=1081473 CLC19222_RS01635 WP_257403739.1 297494..298672(+) (kpsS) [Campylobacter lari subsp. concheus strain RM19222]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIAIKIPKANVYKVNFNGGDFLFYPFNSINYTKSLAELESFYKKLFEEKQIQV
ILMYNDCRKIHEIAISVAKQMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSTFKNM
AFASFLYWLFAFLLSWRFNNSLHHRSLKLFDFLPWFCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHAFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNISLD

Nucleotide

• Length: 1179 bp

>NTDB_id=1081473 CLC19222_RS01635 WP_257403739.1 297494..298672(+) (kpsS) [Campylobacter lari subsp. concheus strain RM19222]
ATGAATTTAAGTAAGAAGTTAAAAAAATTTTCCGGTAAAAATGTTTTGTTACTCCAAGGGCCTGTGGGAGGATTTTTTCG
CAAAATTGCTATAAAAATTCCAAAAGCTAATGTTTATAAAGTAAATTTTAATGGAGGGGATTTTTTATTTTATCCTTTTA
ATAGTATCAATTATACCAAAAGCTTAGCTGAGCTTGAAAGTTTTTATAAAAAGCTTTTTGAAGAAAAGCAAATTCAAGTT
ATTTTGATGTATAATGATTGTAGAAAAATTCATGAGATAGCCATTAGTGTTGCTAAGCAAATGGGTATTGAAGTGTGGAT
TTTTGAAGAAGGGTATATAAGACCAAATTTCATTACTTTTGAAAAAGATGGAGTGAATGCAAACTCTACTTTGCCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTTTCAAGTACTTTTAAAAATATG
GCCTTTGCTTCATTTTTGTATTGGCTTTTTGCTTTTTTACTTTCTTGGCGTTTTAACAACTCCTTGCACCATAGAAGTTT
AAAATTATTTGACTTTTTACCTTGGTTTTGCTCAGTATATAGAAAAAACAAATACAAAATTACAGAAAAAAGTTTAAACG
AGAAAATTCTTTCTTTAAAACAAAAGTATTTTTTAGCTATTTTGCAAGTGCATAATGATACTCAACTTTCCCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAGGTGATTATCTCTTTTGCTAATCATGCCAAAGCAAAGTCTTATCTAGTTTT
TAAGCATCATCCTATGGATCGTGGTTATAGGGATTACACAAAACTTATAGAAGATTTGAGTTTAAAATATAATGTTGAAG
GTAGAATTTTATATGTACATGACTTGCATTTACCTACACTTTTGATCAATGCAAGAGGTACTATAGTCATAAATAGCACA
GTAGGACTTTCTGCTTTATATCACAATAGCCCTTTAAAAGTTATGGGAAAAGCCTTTTATGATATAGAAGGTTTGACTTA
TCAAAAAAGCTTGCATGCTTTTTGGAAAGAATGTAGAGCATATAAACCTGATGCAGTTTTGCACGCTAAATTTAGAAATT
ATGTAATATATAAAACCCAAGTCAATGGAAATTTCTTCAAAAATATTAGTTTAGATTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.785	100	0.633