Detailed information NTG1081455

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: CLC19214_RS01600
• Genome accession: NZ_CP176603
• Coordinates: 289722..290900 (+)
• Length: 392 a.a.
• NCBI ID: WP_257396317.1
• Uniprot ID: -
• Organism: Campylobacter lari subsp. concheus strain RM19214
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 284722..295900

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLC19214_RS01580 (CLC19214_00309)	-	285423..286076 (+)	654	WP_257396321.1	cytidylyltransferase domain-containing protein	-
CLC19214_RS01585 (CLC19214_00310)	-	286076..287065 (+)	990	WP_257396320.1	4-hydroxy-2-ketovalerate aldolase	-
CLC19214_RS01590 (CLC19214_00311)	-	287055..287696 (+)	642	WP_257396319.1	HAD hydrolase-like protein	-
CLC19214_RS01595 (CLC19214_00312)	-	287698..289725 (+)	2028	WP_257396318.1	capsular polysaccharide biosynthesis protein	-
CLC19214_RS01600 (CLC19214_00313)	kpsS	289722..290900 (+)	1179	WP_257396317.1	capsule biosynthesis protein	Regulator
CLC19214_RS01605	-	290897..291532 (-)	636	WP_257396316.1	hypothetical protein	-
CLC19214_RS01610	-	291801..292406 (-)	606	WP_257396315.1	SGNH/GDSL hydrolase family protein	-
CLC19214_RS01615 (CLC19214_00315)	-	292569..293699 (+)	1131	WP_257396314.1	DUF829 domain-containing protein	-
CLC19214_RS01620 (CLC19214_00316)	-	293709..295082 (+)	1374	WP_257396313.1	cytochrome P450	-
CLC19214_RS01625 (CLC19214_00317)	-	295079..295432 (+)	354	WP_039625388.1	membrane protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46330.97 Da
• Isoelectric Point: 10.2181

>NTDB_id=1081455 CLC19214_RS01600 WP_257396317.1 289722..290900(+) (kpsS) [Campylobacter lari subsp. concheus strain RM19214]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIATKIPKAKVYKVNFNGGDFFFYPFKSINYTKSLAELEDFYKKLFKEKQIQV
ILMYNDCRKVHEIAISVAKQMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSTFKNM
AFASFLYWLFAFLLSWYFNNSLHHRSLKLFDFLPWFCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide

• Length: 1179 bp

>NTDB_id=1081455 CLC19214_RS01600 WP_257396317.1 289722..290900(+) (kpsS) [Campylobacter lari subsp. concheus strain RM19214]
ATGAATTTAAGTAAGAAATTAAAAAAATTTTCTGGTAAAAATGTTTTATTGCTCCAAGGGCCCGTGGGTGGATTTTTTCG
TAAAATTGCTACAAAAATCCCAAAAGCTAAGGTTTATAAAGTAAATTTTAATGGAGGAGATTTTTTCTTTTATCCTTTTA
AAAGTATTAATTATACTAAAAGTTTAGCCGAGCTTGAAGACTTTTATAAAAAGCTTTTTAAAGAAAAACAAATTCAAGTT
ATCTTGATGTATAATGATTGTAGAAAAGTACATGAGATAGCCATCAGTGTAGCCAAGCAAATGGGTATTGAAGTATGGAT
TTTTGAAGAAGGTTATATAAGACCAAATTTCATTACTTTTGAAAAAGATGGGGTAAATGCAAACTCGACCCTGCCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTTTCAAGTACTTTTAAAAATATG
GCTTTTGCTTCATTTTTATATTGGCTTTTTGCTTTTTTACTTTCTTGGTATTTTAATAATTCTTTACACCATAGAAGTTT
AAAATTATTTGATTTTTTACCTTGGTTTTGCTCAGTATATAGAAAAAACAAATATAAAATCACAGAAAAAAGTTTAAACG
AGAAAATTCTTTCTTTAAAACAAAAGTATTTTCTAGCTATTTTGCAAGTGCATAATGATACTCAACTATCCCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAGGTGATTATCTCTTTTGCTAATCATGCCAAAGCAAAGTCTTATCTAGTTTT
TAAGCATCATCCTATGGACCGTGGTTATAGAGACTATACTAAGCTTATAGAAGATTTGAGTTTAAAATATAATGTTGAAG
GTAGAATTTTATATGTACATGATTTGCATTTGCCTACACTTTTGATCAATGCAAGAGGTACTATAGTCATAAATAGCACA
GTAGGACTTTCTGCTTTATATCACAATAGCCCTTTAAAAGTTATGGGAAAAGCCTTTTATGATATAGAAGGTTTGACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGTAGAGCATATAAGCCTGATGCGGTTTTGCACGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTCAATGGAAATTTCTTCAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.038	100	0.635