Detailed information NTG1081422

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: CLC19175_RS01535
• Genome accession: NZ_CP176601
• Coordinates: 273093..274271 (+)
• Length: 392 a.a.
• NCBI ID: WP_257402377.1
• Uniprot ID: -
• Organism: Campylobacter lari subsp. concheus strain RM19175
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 268093..279271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLC19175_RS01520 (CLC19175_00300)	-	268808..269533 (+)	726	WP_257402374.1	class II aldolase/adducin family protein	-
CLC19175_RS01525 (CLC19175_00301)	-	269535..271031 (+)	1497	WP_257402375.1	sugar phosphate nucleotidyltransferase	-
CLC19175_RS01530 (CLC19175_00302)	-	271069..273096 (+)	2028	WP_257402376.1	capsular polysaccharide biosynthesis protein	-
CLC19175_RS01535 (CLC19175_00303)	kpsS	273093..274271 (+)	1179	WP_257402377.1	capsule biosynthesis protein	Regulator
CLC19175_RS01540 (CLC19175_00304)	-	274268..275776 (-)	1509	WP_410709207.1	hypothetical protein	-
CLC19175_RS01545 (CLC19175_00305)	-	275939..277069 (+)	1131	WP_257402219.1	DUF829 domain-containing protein	-
CLC19175_RS01550 (CLC19175_00306)	-	277079..278452 (+)	1374	WP_039668040.1	cytochrome P450	-
CLC19175_RS01555 (CLC19175_00307)	-	278449..278802 (+)	354	WP_039627957.1	membrane protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46382.90 Da
• Isoelectric Point: 10.1073

>NTDB_id=1081422 CLC19175_RS01535 WP_257402377.1 273093..274271(+) (kpsS) [Campylobacter lari subsp. concheus strain RM19175]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIAIKIPKANVYKVNFNGGDFLFYPFNSINYTKSLVELESFYKKLFEEKQIQV
ILMYNDCRKIHEIAINVAKQMDIEVWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSTFKNM
AFASFLYWFFAFLLSWYFNNSLHHRSLKLFDFLPWFCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIVSFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVIGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide

• Length: 1179 bp

>NTDB_id=1081422 CLC19175_RS01535 WP_257402377.1 273093..274271(+) (kpsS) [Campylobacter lari subsp. concheus strain RM19175]
ATGAATTTAAGTAAGAAGTTAAAAAAATTTTCCGGTAAAAATGTTTTGTTACTCCAAGGGCCTGTGGGAGGATTTTTTCG
CAAAATTGCTATAAAAATTCCAAAAGCTAATGTTTATAAAGTAAATTTTAATGGAGGAGATTTTTTATTTTATCCTTTTA
ATAGTATCAATTATACCAAAAGCTTAGTTGAGCTTGAAAGTTTTTATAAAAAGCTTTTTGAAGAAAAGCAAATTCAAGTT
ATTTTGATGTATAATGATTGTAGAAAAATTCATGAGATAGCCATTAATGTAGCTAAGCAAATGGATATTGAAGTGTGGAT
TTTTGAAGAAGGGTATATAAGACCAAATTTCATTACTTTTGAAAAAGATGGAGTGAATGCAAACTCTACTTTGCCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTTTCAAGTACTTTTAAAAATATG
GCTTTTGCTTCATTTTTATACTGGTTTTTTGCTTTTTTACTTTCTTGGTATTTTAATAATTCTTTACACCATAGAAGTTT
AAAATTATTTGACTTTTTACCTTGGTTTTGCTCAGTATATAGAAAAAACAAATACAAAATCACAGAAAAAAGTTTAAACG
AGAAAATTCTTTCTTTAAAACAAAAGTATTTTTTAGCTATTTTACAAGTGCATAATGATACTCAATTGTCTCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAAGTGATTGTTTCTTTTGCTAATCATGCTAAAGCAAAGTCTTATCTAGTTTT
TAAACATCATCCTATGGATCGTGGTTATAGAGACTATACTAAGCTTATAGAAGATTTGAGTTTAAAATACAATGTTGAAG
GTAGAATTTTATATGTACATGATTTGCATTTGCCTACACTTTTGATCAATGCAAGAGGTACTATAGTCATAAATAGCACA
GTAGGACTTTCTGCTTTATATCATAATAGTCCTTTAAAGGTTATAGGAAAAGCCTTTTATGATATAGAAGGTTTGACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGTAGAGCATATAAGCCTGATGCGGTTTTGCACGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTCAATGGAAATTTCTTCAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.278	100	0.628