Detailed information NTG1081210

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: UPTC5105_RS01590
• Genome accession: NZ_CP176589
• Coordinates: 287266..288444 (+)
• Length: 392 a.a.
• NCBI ID: WP_257904492.1
• Uniprot ID: -
• Organism: Campylobacter lari strain S3:28
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 282266..293444

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC5105_RS01570 (UPTC5105_00312)	-	282967..283620 (+)	654	WP_257904488.1	cytidylyltransferase domain-containing protein	-
UPTC5105_RS01575 (UPTC5105_00313)	-	283620..284609 (+)	990	WP_257904489.1	4-hydroxy-2-ketovalerate aldolase	-
UPTC5105_RS01580 (UPTC5105_00314)	-	284599..285240 (+)	642	WP_257904490.1	HAD-IA family hydrolase	-
UPTC5105_RS01585 (UPTC5105_00315)	-	285242..287269 (+)	2028	WP_257904491.1	capsular polysaccharide biosynthesis protein	-
UPTC5105_RS01590 (UPTC5105_00316)	kpsS	287266..288444 (+)	1179	WP_257904492.1	capsule biosynthesis protein	Regulator
UPTC5105_RS01595 (UPTC5105_00317)	-	288441..289949 (-)	1509	WP_257904493.1	SGNH/GDSL hydrolase family protein	-
UPTC5105_RS01600 (UPTC5105_00318)	-	290113..291243 (+)	1131	WP_257904494.1	DUF829 domain-containing protein	-
UPTC5105_RS01605 (UPTC5105_00319)	-	291253..292626 (+)	1374	WP_257904495.1	cytochrome P450	-
UPTC5105_RS01610 (UPTC5105_00320)	-	292623..292976 (+)	354	WP_039625388.1	membrane protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46427.96 Da
• Isoelectric Point: 10.1408

>NTDB_id=1081210 UPTC5105_RS01590 WP_257904492.1 287266..288444(+) (kpsS) [Campylobacter lari strain S3:28]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIATKIPQAKVYKVNFNGGDFFFYPFKSINYTKSLADLEDFYKKLFEEKQIQV
IIMYNDCRKVHEIAINVAKQMGIEIWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLNQKKFDKDFKFKTFSSTFRNM
AFASFLYWLFAFLFSWYFNNSLHHRSLKLFDFLPWLCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLIFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide

• Length: 1179 bp

>NTDB_id=1081210 UPTC5105_RS01590 WP_257904492.1 287266..288444(+) (kpsS) [Campylobacter lari strain S3:28]
ATGAATTTAAGTAAGAAGTTAAAAAAATTTTCTGGTAAAAATGTTTTATTACTCCAAGGACCTGTGGGTGGATTTTTTCG
TAAAATTGCTACAAAAATTCCACAAGCTAAGGTTTATAAAGTAAATTTTAATGGCGGAGATTTTTTCTTTTATCCTTTTA
AAAGCATTAACTACACTAAAAGTTTAGCCGATCTTGAAGACTTTTATAAAAAGCTTTTTGAAGAAAAACAAATTCAAGTT
ATCATTATGTATAATGATTGTAGAAAAGTACATGAAATAGCCATTAATGTAGCTAAGCAAATGGGTATTGAAATATGGAT
TTTTGAAGAAGGTTATATAAGACCAAATTTCATTACTTTTGAAAAAGATGGAGTGAATGCAAACTCCACTTTGCCAAGAG
AAAAAGAATTTTATCTAAACCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTCTCAAGCACTTTTAGAAATATG
GCCTTTGCTTCGTTTTTATATTGGCTTTTTGCTTTTTTGTTTTCTTGGTATTTTAATAATTCTTTACACCATAGAAGTTT
AAAATTATTTGACTTTTTGCCTTGGCTTTGCTCAGTATATAGAAAAAACAAATACAAAATCACAGAAAAAAGTTTAAATG
AAAAAATTCTTTCTCTAAAACAAAAGTATTTTTTAGCTATTTTACAAGTGCATAATGATACTCAACTATCTCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAGGTGATTATCTCTTTTGCTAATCATGCCAAAGCAAAGTCTTATTTAATTTT
TAAGCACCATCCTATGGATCGTGGCTATAGGGACTATACTAAGCTTATAGAAGATTTGAGTTTAAAATATAATGTCGAGG
GTAGAATTTTATATGTACATGACTTACACTTACCTACGCTCTTAATCAATGCAAGAGGCACTATAGTGATAAATAGCACA
GTAGGACTTTCTGCTTTATATCACAATAGTCCTTTAAAGGTTATGGGTAAAGCTTTTTATGATATTGAAGGCCTAACGTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGCAGAGCGTATAAACCTGATGCGGTTTTGCATGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTCAATGGGAATTTTTTCAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.025	100	0.625