Detailed information NTG1081193

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: UPTC5100_RS01645
• Genome accession: NZ_CP176588
• Coordinates: 294109..295287 (+)
• Length: 392 a.a.
• NCBI ID: WP_039627951.1
• Uniprot ID: -
• Organism: Campylobacter lari strain M595a
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 289109..300287

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC5100_RS01625 (UPTC5100_00320)	-	289810..290451 (+)	642	WP_039627944.1	CMP-N-acetylneuraminic acid synthetase	-
UPTC5100_RS01630 (UPTC5100_00321)	-	290463..291452 (+)	990	WP_039627946.1	4-hydroxy-2-oxovalerate aldolase-like protein	-
UPTC5100_RS01635 (UPTC5100_00322)	-	291442..292083 (+)	642	WP_039627948.1	HAD hydrolase-like protein	-
UPTC5100_RS01640 (UPTC5100_00323)	-	292085..294112 (+)	2028	WP_039627950.1	capsular polysaccharide export protein	-
UPTC5100_RS01645 (UPTC5100_00324)	kpsS	294109..295287 (+)	1179	WP_039627951.1	capsular polysaccharide export protein	Regulator
UPTC5100_RS01650 (UPTC5100_00325)	-	295284..296792 (-)	1509	WP_410689971.1	hypothetical protein	-
UPTC5100_RS01655 (UPTC5100_00326)	-	296954..298084 (+)	1131	WP_258108767.1	DUF829 domain-containing protein	-
UPTC5100_RS01660 (UPTC5100_00327)	-	298094..299467 (+)	1374	WP_258108766.1	cytochrome P450	-
UPTC5100_RS01665 (UPTC5100_00328)	-	299464..299817 (+)	354	WP_039625388.1	membrane protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46343.89 Da
• Isoelectric Point: 10.1677

>NTDB_id=1081193 UPTC5100_RS01645 WP_039627951.1 294109..295287(+) (kpsS) [Campylobacter lari strain M595a]
MNLSKKLKNFSGKNVLLLQGPVGGFFRKIATKIPQAKVYKVNFNGGDFFFYPFKSINYTKSLAKLEDFYKKLFEEKQIQV
VIMYNDCRKVHEIAINVAKQMGIEIWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSTFKNM
AFASFLYWLFAFLFSWYFNNSLHHRSLKLFDFLPWLCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide

• Length: 1179 bp

>NTDB_id=1081193 UPTC5100_RS01645 WP_039627951.1 294109..295287(+) (kpsS) [Campylobacter lari strain M595a]
ATGAATTTAAGTAAGAAGTTAAAAAATTTTTCTGGTAAAAATGTTTTATTACTCCAAGGACCTGTGGGTGGATTTTTTCG
TAAAATTGCTACAAAAATTCCACAAGCTAAGGTTTATAAAGTAAATTTTAATGGTGGAGATTTTTTCTTTTATCCTTTTA
AAAGCATTAATTACACTAAAAGTTTAGCCAAGCTTGAAGACTTTTATAAAAAGCTTTTTGAAGAAAAACAAATTCAAGTT
GTTATTATGTACAATGATTGTAGAAAAGTACATGAAATAGCCATTAATGTAGCTAAGCAAATGGGTATTGAAATATGGAT
TTTTGAAGAAGGTTATATAAGACCAAACTTCATTACTTTTGAAAAAGATGGAGTGAATGCAAACTCAACTCTACCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTCTCAAGTACTTTTAAAAATATG
GCCTTTGCTTCGTTTTTATACTGGCTTTTTGCTTTTTTATTTTCTTGGTATTTTAATAATTCTTTACACCATAGAAGTTT
AAAATTATTTGACTTTTTACCTTGGCTTTGTTCAGTATATAGAAAAAACAAATACAAAATCACAGAAAAAAGTTTAAATG
AAAAAATTCTTTCCCTAAAACAAAAGTATTTTTTAGCTATTTTACAAGTGCATAATGATACTCAACTTTCTCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAAGTGATTATCTCTTTTGCTAATCATGCCAAAGCAAAGTCTTATCTAGTTTT
TAAGCACCATCCTATGGATCGTGGCTATAGGGACTATACTAAGCTTATAGAAGATTTGAGTTTAAAATATAATGTCGAGG
GTAGAATTTTATATGTACATGACTTACACTTACCTACACTCTTAATCAATGCAAGAGGCACTATAGTCATAAATAGCACA
GTAGGACTTTCTGCTTTATATCACAATAGTCCTTTAAAAGTTATGGGAAAAGCTTTTTATGATATTGAAGGTTTGACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGCAGAGCATATAAACCTGATGCGGTTTTACATGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTCAATGGGAATTTTTTCAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.626	100	0.633