Detailed information NTG1081140

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: UPTC5084_RS01635
• Genome accession: NZ_CP176585
• Coordinates: 294555..295733 (+)
• Length: 392 a.a.
• NCBI ID: WP_257942050.1
• Uniprot ID: -
• Organism: Campylobacter lari strain S3:34
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 289555..300733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC5084_RS01620 (UPTC5084_00322)	-	289764..291362 (+)	1599	WP_410708458.1	hypothetical protein	-
UPTC5084_RS01625 (UPTC5084_00323)	-	291359..292534 (+)	1176	WP_263691437.1	DUF6716 putative glycosyltransferase	-
UPTC5084_RS01630 (UPTC5084_00324)	-	292531..294558 (+)	2028	WP_257942049.1	capsular polysaccharide biosynthesis protein	-
UPTC5084_RS01635 (UPTC5084_00325)	kpsS	294555..295733 (+)	1179	WP_257942050.1	capsule biosynthesis protein	Regulator
UPTC5084_RS01640 (UPTC5084_00326)	-	295866..296996 (+)	1131	WP_257942051.1	DUF829 domain-containing protein	-
UPTC5084_RS01645 (UPTC5084_00327)	-	297006..298379 (+)	1374	WP_257942052.1	cytochrome P450	-
UPTC5084_RS01650 (UPTC5084_00328)	-	298376..298729 (+)	354	WP_039627957.1	membrane protein	-
UPTC5084_RS01655 (UPTC5084_00329)	nusA	298726..299817 (-)	1092	WP_257942053.1	transcription termination factor NusA	-
UPTC5084_RS01660 (UPTC5084_00330)	-	299942..300184 (+)	243	WP_039617566.1	HP0268 family nuclease	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 46470.04 Da
• Isoelectric Point: 10.1408

>NTDB_id=1081140 UPTC5084_RS01635 WP_257942050.1 294555..295733(+) (kpsS) [Campylobacter lari strain S3:34]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIATKIPQAKVYKVNFNGGDFFFYPFKSINYTKSLAELEDFYKKLFEEKQIQV
VIMYNDCRKVHEIAINVAKQMGIEIWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKTFSSAFRNM
AFASFLYWLFAFLFSWYFNNSLHHRSLKLFDFLPWLCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINTRGTIVINST
VGLSALYHNSPLKVMGKAFYDIEDLTYQKSLHTFWKECRAYKPDVVLHAKFRNYVIYKTQVNGNFFKNVSLN

Nucleotide

• Length: 1179 bp

>NTDB_id=1081140 UPTC5084_RS01635 WP_257942050.1 294555..295733(+) (kpsS) [Campylobacter lari strain S3:34]
ATGAATTTAAGTAAGAAGTTAAAAAAATTTTCTGGTAAAAATGTTTTATTGCTCCAAGGACCTGTGGGTGGATTTTTTCG
TAAAATCGCTACAAAAATTCCGCAAGCTAAGGTTTATAAAGTAAATTTTAATGGTGGAGATTTTTTCTTTTATCCTTTTA
AAAGTATTAATTACACTAAAAGTTTAGCCGAGCTTGAAGACTTTTATAAAAAGCTTTTTGAAGAAAAACAAATTCAAGTT
GTTATTATGTACAATGATTGTAGAAAAGTGCATGAAATAGCCATTAATGTAGCTAAGCAAATGGGTATTGAAATATGGAT
TTTTGAAGAAGGTTATATAAGACCAAACTTCATTACTTTTGAAAAAGATGGAGTGAATGCAAACTCAACTCTACCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAACTTTCTCAAGTGCTTTTAGAAATATG
GCCTTTGCTTCGTTTTTATACTGGCTTTTTGCTTTTTTATTTTCTTGGTATTTTAATAATTCTTTACACCATAGAAGTTT
AAAATTATTTGACTTTTTACCTTGGCTTTGTTCAGTATATAGAAAAAACAAATACAAAATCACAGAAAAAAGTTTAAATG
AAAAAATTCTTTCCCTAAAACAAAAGTATTTTTTAGCTATTTTGCAAGTGCATAATGATACTCAACTCTCCCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAGGTAATCATCTCTTTTGCTAATCATGCTAAAGCAAAGTCTTATCTAGTTTT
TAAACATCATCCTATGGATCGTGGTTATAGGGATTATACAAAACTTATAGAAGATTTGAGCTTAAAATACAATGTCGAGG
GTAGAATTTTATATGTACATGACTTACACTTACCTACGCTTTTAATCAATACAAGAGGCACTATAGTCATAAATAGCACG
GTAGGACTTTCTGCTTTATACCACAATAGCCCTTTAAAAGTTATGGGAAAAGCCTTTTATGATATAGAAGACCTAACGTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGCAGAGCATATAAACCTGATGTGGTTTTACATGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTCAATGGGAATTTTTTCAAAAACGTTAGTTTAAATTGA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (80-386)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.266	100	0.617