Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   ACKZ7V_RS13330 Genome accession   NZ_CP176566
Coordinates   2680452..2681168 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain IMT37083     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2675452..2686168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7V_RS13300 (ACKZ7V_13300) - 2675706..2676332 (+) 627 WP_000522384.1 nitroreductase family protein -
  ACKZ7V_RS13305 (ACKZ7V_13305) - 2676656..2677441 (+) 786 WP_086153164.1 carbon-nitrogen family hydrolase -
  ACKZ7V_RS13310 (ACKZ7V_13310) hld 2678040..2678120 (-) 81 WP_000046022.1 delta-hemolysin -
  ACKZ7V_RS13315 (ACKZ7V_13315) - 2678411..2678974 (+) 564 WP_001105699.1 accessory gene regulator AgrB -
  ACKZ7V_RS13320 (ACKZ7V_13320) agrD 2678977..2679120 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  ACKZ7V_RS13325 (ACKZ7V_13325) agrC 2679150..2680433 (+) 1284 WP_000447894.1 quorum-sensing sensor histidine kinase AgrC -
  ACKZ7V_RS13330 (ACKZ7V_13330) agrA 2680452..2681168 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  ACKZ7V_RS13335 (ACKZ7V_13335) - 2681240..2681347 (+) 108 WP_041204320.1 hypothetical protein -
  ACKZ7V_RS13340 (ACKZ7V_13340) - 2681535..2682494 (-) 960 WP_148843713.1 carbohydrate kinase family protein -
  ACKZ7V_RS13345 (ACKZ7V_13345) - 2682491..2683975 (-) 1485 WP_111762504.1 sucrose-6-phosphate hydrolase -
  ACKZ7V_RS13350 (ACKZ7V_13350) - 2684124..2685074 (-) 951 WP_000790321.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=1080961 ACKZ7V_RS13330 WP_000688492.1 2680452..2681168(+) (agrA) [Staphylococcus aureus strain IMT37083]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1080961 ACKZ7V_RS13330 WP_000688492.1 2680452..2681168(+) (agrA) [Staphylococcus aureus strain IMT37083]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGATCCA
GTTGGTAACATTATATTTGTTACGAGTCACAGTGAACTTACCTATTTAACGTTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment